Gene : Glyma.13G146900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12280:SF20 - PANTOTHENATE KINASE 4 Genomic Order:  1469
Name:  ? Glyma.13G146900 Secondary Identifier:  ? PAC:30501414
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PANTO-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G146900 0.5kb upstream 0.5kb upstream 14312 true Chr13: 26001597-26015908 Glycine max
Glyma.13G146900 0.5kb upstream 0.5kb upstream 500 false Chr13: 26001597-26002096 Glycine max
Glyma.13G146900 0.5kb downstream 0.5kb downstream 14312 true Chr13: 26002097-26016408 Glycine max
Glyma.13G146900 0.5kb downstream 0.5kb downstream 500 false Chr13: 26015909-26016408 Glycine max
Glyma.13G146900 1.0kb upstream 1.0kb upstream 14812 true Chr13: 26001097-26015908 Glycine max
Glyma.13G146900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 26001097-26002096 Glycine max
Glyma.13G146900 1.0kb downstream 1.0kb downstream 14812 true Chr13: 26002097-26016908 Glycine max
Glyma.13G146900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 26015909-26016908 Glycine max
Glyma.13G146900 2.0kb upstream 2.0kb upstream 15812 true Chr13: 26000097-26015908 Glycine max
Glyma.13G146900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 26000097-26002096 Glycine max
Glyma.13G146900 2.0kb downstream 2.0kb downstream 15812 true Chr13: 26002097-26017908 Glycine max
Glyma.13G146900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 26015909-26017908 Glycine max
Glyma.13G146900 5.0kb upstream 5.0kb upstream 18812 true Chr13: 25997097-26015908 Glycine max
Glyma.13G146900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25997097-26002096 Glycine max
Glyma.13G146900 5.0kb downstream 5.0kb downstream 18812 true Chr13: 26002097-26020908 Glycine max
Glyma.13G146900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 26015909-26020908 Glycine max
Glyma.13G146900 10.0kb upstream 10.0kb upstream 23812 true Chr13: 25992097-26015908 Glycine max
Glyma.13G146900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25992097-26002096 Glycine max
Glyma.13G146900 10.0kb downstream 10.0kb downstream 23812 true Chr13: 26002097-26025908 Glycine max
Glyma.13G146900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 26015909-26025908 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307089 5265 Fabidae View MSA
124064152 5270 Rosid View MSA
123740683 5271 Pentapetalae View MSA
122792493 5272 Eudicot View MSA
122044424 5273 Angiosperm View MSA
121351154 5274 Embryophyte View MSA
123423808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.16604 0.0 7.83126    
cufflinks 2.87156 0.0 11.1751   High
cufflinks 1.26274 0.0 5.343    
cufflinks 2.12331 0.0 9.20648    
cufflinks 1.03451 0.0 4.83824    
cufflinks 0.90672 0.0 3.24134   Low
cufflinks 3.86919 0.0 12.2668   High
cufflinks 1.16611 0.0 3.944    
cufflinks 1.13594 0.0 5.07263    
cufflinks 0.223       Low
cufflinks 0.584        
cufflinks 0.371        
cufflinks 0.156       Low
cufflinks 0.138       Low
cufflinks 1.655       High
cufflinks 0.589        
cufflinks 0.207       Low
cufflinks 0.769        
cufflinks 0.717        
cufflinks 0.774        
cufflinks 0.419        
cufflinks 0.727        
cufflinks 0.612        
cufflinks 0.459        
cufflinks 0.726        
cufflinks 0.282        

0 Strain