Gene : Glyma.13G136100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10848:SF0 - MEIOTIC RECOMBINATION PROTEIN SPO11 Genomic Order:  1361
Name:  ? Glyma.13G136100 Secondary Identifier:  ? PAC:30505659
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G136100 0.5kb upstream 0.5kb upstream 3494 true Chr13: 24861130-24864623 Glycine max
Glyma.13G136100 0.5kb upstream 0.5kb upstream 500 false Chr13: 24861130-24861629 Glycine max
Glyma.13G136100 0.5kb downstream 0.5kb downstream 3494 true Chr13: 24861630-24865123 Glycine max
Glyma.13G136100 0.5kb downstream 0.5kb downstream 500 false Chr13: 24864624-24865123 Glycine max
Glyma.13G136100 1.0kb upstream 1.0kb upstream 3994 true Chr13: 24860630-24864623 Glycine max
Glyma.13G136100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24860630-24861629 Glycine max
Glyma.13G136100 1.0kb downstream 1.0kb downstream 3994 true Chr13: 24861630-24865623 Glycine max
Glyma.13G136100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24864624-24865623 Glycine max
Glyma.13G136100 2.0kb upstream 2.0kb upstream 4994 true Chr13: 24859630-24864623 Glycine max
Glyma.13G136100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24859630-24861629 Glycine max
Glyma.13G136100 2.0kb downstream 2.0kb downstream 4994 true Chr13: 24861630-24866623 Glycine max
Glyma.13G136100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24864624-24866623 Glycine max
Glyma.13G136100 5.0kb upstream 5.0kb upstream 7994 true Chr13: 24856630-24864623 Glycine max
Glyma.13G136100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24856630-24861629 Glycine max
Glyma.13G136100 5.0kb downstream 5.0kb downstream 7994 true Chr13: 24861630-24869623 Glycine max
Glyma.13G136100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24864624-24869623 Glycine max
Glyma.13G136100 10.0kb upstream 10.0kb upstream 12994 true Chr13: 24851630-24864623 Glycine max
Glyma.13G136100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24851630-24861629 Glycine max
Glyma.13G136100 10.0kb downstream 10.0kb downstream 12994 true Chr13: 24861630-24874623 Glycine max
Glyma.13G136100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24864624-24874623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303659 5265 Fabidae View MSA
124068832 5270 Rosid View MSA
123738269 5271 Pentapetalae View MSA
122790268 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.67203 0.0 23.7237   High
cufflinks 6.86259 0.0 19.1652    
cufflinks 5.14784 0.0 14.8356    
cufflinks 4.44423 0.0 13.0413    
cufflinks 6.46052 0.0 18.0797    
cufflinks 3.19513 0.0 9.78459   Low
cufflinks 6.26249 0.0 17.606    
cufflinks 5.24898 0.0 15.0543    
cufflinks 5.66041 0.0 16.0801    
cufflinks 1.406       Low
cufflinks 1.319       Low
cufflinks 2.433        
cufflinks 2.99        
cufflinks 3.278       High
cufflinks 2.428        
cufflinks 2.115        
cufflinks 1.873        
cufflinks 2.117        
cufflinks 5.526       High
cufflinks 1.556        
cufflinks 1.374       Low
cufflinks 1.983        
cufflinks 3.026        
cufflinks 1.324       Low
cufflinks 1.741        
cufflinks 1.976        

0 Strain