Gene : Glyma.13G136600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21136//PTHR21136:SF106 - SNARE PROTEINS Genomic Order:  1366
Name:  ? Glyma.13G136600 Secondary Identifier:  ? PAC:30504604
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G136600 0.5kb upstream 0.5kb upstream 5424 true Chr13: 24918271-24923694 Glycine max
Glyma.13G136600 0.5kb upstream 0.5kb upstream 500 false Chr13: 24923195-24923694 Glycine max
Glyma.13G136600 0.5kb downstream 0.5kb downstream 5424 true Chr13: 24917771-24923194 Glycine max
Glyma.13G136600 0.5kb downstream 0.5kb downstream 500 false Chr13: 24917771-24918270 Glycine max
Glyma.13G136600 1.0kb upstream 1.0kb upstream 5924 true Chr13: 24918271-24924194 Glycine max
Glyma.13G136600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24923195-24924194 Glycine max
Glyma.13G136600 1.0kb downstream 1.0kb downstream 5924 true Chr13: 24917271-24923194 Glycine max
Glyma.13G136600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24917271-24918270 Glycine max
Glyma.13G136600 2.0kb upstream 2.0kb upstream 6924 true Chr13: 24918271-24925194 Glycine max
Glyma.13G136600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24923195-24925194 Glycine max
Glyma.13G136600 2.0kb downstream 2.0kb downstream 6924 true Chr13: 24916271-24923194 Glycine max
Glyma.13G136600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24916271-24918270 Glycine max
Glyma.13G136600 5.0kb upstream 5.0kb upstream 9924 true Chr13: 24918271-24928194 Glycine max
Glyma.13G136600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24923195-24928194 Glycine max
Glyma.13G136600 5.0kb downstream 5.0kb downstream 9924 true Chr13: 24913271-24923194 Glycine max
Glyma.13G136600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24913271-24918270 Glycine max
Glyma.13G136600 10.0kb upstream 10.0kb upstream 14924 true Chr13: 24918271-24933194 Glycine max
Glyma.13G136600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24923195-24933194 Glycine max
Glyma.13G136600 10.0kb downstream 10.0kb downstream 14924 true Chr13: 24908271-24923194 Glycine max
Glyma.13G136600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24908271-24918270 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301474 5265 Fabidae View MSA
124074521 5270 Rosid View MSA
123750725 5271 Pentapetalae View MSA
122788726 5272 Eudicot View MSA
122044882 5273 Angiosperm View MSA
121346186 5274 Embryophyte View MSA
123424680 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.8911 0.0 142.293 High  
cufflinks 44.7759 0.0 119.781 High  
cufflinks 110.568 0.0 316.282 High High
cufflinks 52.3747 0.0 140.876 High  
cufflinks 41.0597 0.0 109.685 High  
cufflinks 110.101 0.0 315.065 High High
cufflinks 31.3079 0.0 83.597 High Low
cufflinks 77.1124 0.0 212.649 High  
cufflinks 40.0539 0.0 106.938 High  
cufflinks 11.16     High High
cufflinks 12.262     High High
cufflinks 9.414     High  
cufflinks 7.877     High  
cufflinks 6.416       Low
cufflinks 5.947     High Low
cufflinks 8.133     High  
cufflinks 5.759       Low
cufflinks 7.101        
cufflinks 7.837     High  
cufflinks 8.365     High  
cufflinks 12.335     High High
cufflinks 8.55     High  
cufflinks 6.596        
cufflinks 12.365     High High
cufflinks 8.161     High  
cufflinks 9.012     High  

0 Strain