Gene : Glyma.13G138200 G. max Wm82.a2.v1
Defline:  (1 of 4) PF04689 - DNA binding protein S1FA (S1FA) Genomic Order:  1382
Name:  ? Glyma.13G138200 Secondary Identifier:  ? PAC:30504762
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G138200 0.5kb upstream 0.5kb upstream 3121 true Chr13: 25085181-25088301 Glycine max
Glyma.13G138200 0.5kb upstream 0.5kb upstream 500 false Chr13: 25087802-25088301 Glycine max
Glyma.13G138200 0.5kb downstream 0.5kb downstream 3121 true Chr13: 25084681-25087801 Glycine max
Glyma.13G138200 0.5kb downstream 0.5kb downstream 500 false Chr13: 25084681-25085180 Glycine max
Glyma.13G138200 1.0kb upstream 1.0kb upstream 3621 true Chr13: 25085181-25088801 Glycine max
Glyma.13G138200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25087802-25088801 Glycine max
Glyma.13G138200 1.0kb downstream 1.0kb downstream 3621 true Chr13: 25084181-25087801 Glycine max
Glyma.13G138200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25084181-25085180 Glycine max
Glyma.13G138200 2.0kb upstream 2.0kb upstream 4621 true Chr13: 25085181-25089801 Glycine max
Glyma.13G138200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25087802-25089801 Glycine max
Glyma.13G138200 2.0kb downstream 2.0kb downstream 4621 true Chr13: 25083181-25087801 Glycine max
Glyma.13G138200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25083181-25085180 Glycine max
Glyma.13G138200 5.0kb upstream 5.0kb upstream 7621 true Chr13: 25085181-25092801 Glycine max
Glyma.13G138200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25087802-25092801 Glycine max
Glyma.13G138200 5.0kb downstream 5.0kb downstream 7621 true Chr13: 25080181-25087801 Glycine max
Glyma.13G138200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25080181-25085180 Glycine max
Glyma.13G138200 10.0kb upstream 10.0kb upstream 12621 true Chr13: 25085181-25097801 Glycine max
Glyma.13G138200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25087802-25097801 Glycine max
Glyma.13G138200 10.0kb downstream 10.0kb downstream 12621 true Chr13: 25075181-25087801 Glycine max
Glyma.13G138200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25075181-25085180 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314911 5265 Fabidae View MSA
124072981 5270 Rosid View MSA
123737757 5271 Pentapetalae View MSA
122787039 5272 Eudicot View MSA
122043521 5273 Angiosperm View MSA
121348101 5274 Embryophyte View MSA
123427366 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.5135 0.0 86.719 High  
cufflinks 50.1185 0.0 134.331 High  
cufflinks 23.1342 0.0 65.5316 High Low
cufflinks 47.0865 0.0 126.463 High  
cufflinks 66.4933 0.0 177.402 High  
cufflinks 83.1767 0.0 222.296 High  
cufflinks 315.823 0.0 955.715 High High
cufflinks 57.4487 0.0 153.445 High  
cufflinks 52.0669 0.0 139.401 High  
cufflinks 11.928     High High
cufflinks 6.73     High  
cufflinks 5.835        
cufflinks 14.322     High High
cufflinks 17.31     High High
cufflinks 3.377       Low
cufflinks 7.26     High  
cufflinks 4.453       Low
cufflinks 5.976        
cufflinks 9.258     High  
cufflinks 5.794        
cufflinks 8.966     High  
cufflinks 6.056        
cufflinks 6.886        
cufflinks 8.54     High  
cufflinks 5.713        
cufflinks 9.618     High  

0 Strain