Gene : Glyma.13G139900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12713 - VACUOLAR ATP SYNTHASE SUBUNIT G Genomic Order:  1399
Name:  ? Glyma.13G139900 Secondary Identifier:  ? PAC:30502315
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G139900 0.5kb upstream 0.5kb upstream 2778 true Chr13: 25256347-25259124 Glycine max
Glyma.13G139900 0.5kb upstream 0.5kb upstream 500 false Chr13: 25258625-25259124 Glycine max
Glyma.13G139900 0.5kb downstream 0.5kb downstream 2778 true Chr13: 25255847-25258624 Glycine max
Glyma.13G139900 0.5kb downstream 0.5kb downstream 500 false Chr13: 25255847-25256346 Glycine max
Glyma.13G139900 1.0kb upstream 1.0kb upstream 3278 true Chr13: 25256347-25259624 Glycine max
Glyma.13G139900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25258625-25259624 Glycine max
Glyma.13G139900 1.0kb downstream 1.0kb downstream 3278 true Chr13: 25255347-25258624 Glycine max
Glyma.13G139900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25255347-25256346 Glycine max
Glyma.13G139900 2.0kb upstream 2.0kb upstream 4278 true Chr13: 25256347-25260624 Glycine max
Glyma.13G139900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25258625-25260624 Glycine max
Glyma.13G139900 2.0kb downstream 2.0kb downstream 4278 true Chr13: 25254347-25258624 Glycine max
Glyma.13G139900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25254347-25256346 Glycine max
Glyma.13G139900 5.0kb upstream 5.0kb upstream 7278 true Chr13: 25256347-25263624 Glycine max
Glyma.13G139900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25258625-25263624 Glycine max
Glyma.13G139900 5.0kb downstream 5.0kb downstream 7278 true Chr13: 25251347-25258624 Glycine max
Glyma.13G139900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25251347-25256346 Glycine max
Glyma.13G139900 10.0kb upstream 10.0kb upstream 12278 true Chr13: 25256347-25268624 Glycine max
Glyma.13G139900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25258625-25268624 Glycine max
Glyma.13G139900 10.0kb downstream 10.0kb downstream 12278 true Chr13: 25246347-25258624 Glycine max
Glyma.13G139900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25246347-25256346 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041228 5273 Angiosperm View MSA
122310150 5265 Fabidae View MSA
124071685 5270 Rosid View MSA
123752042 5271 Pentapetalae View MSA
122795974 5272 Eudicot View MSA
121344962 5274 Embryophyte View MSA
123424179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.5082 0.0 100.98 High Low
cufflinks 38.485 0.0 131.353 High  
cufflinks 33.8631 0.0 117.014 High  
cufflinks 50.6302 0.0 174.557 High  
cufflinks 74.7951 0.0 264.923 High High
cufflinks 96.7905 0.0 356.424 High High
cufflinks 33.6058 0.0 115.779 High Low
cufflinks 60.2902 0.0 207.935 High  
cufflinks 55.4382 0.0 190.428 High  
cufflinks 20.306     High High
cufflinks 5.898     High Low
cufflinks 9.053     High  
cufflinks 24.868     High High
cufflinks 28.592     High High
cufflinks 9.105     High  
cufflinks 9.877     High  
cufflinks 7.606     High  
cufflinks 13.844     High  
cufflinks 10.6     High  
cufflinks 7.836     High  
cufflinks 9.259     High  
cufflinks 8.818     High  
cufflinks 9.197     High  
cufflinks 6.825     High  
cufflinks 8.933     High  
cufflinks 9.499     High  

0 Strain