Gene : Glyma.13G140600 G. max Wm82.a2.v1
Defline:  (1 of 20) PF02362//PF06507 - B3 DNA binding domain (B3) // Auxin response factor (Auxin_resp) Genomic Order:  1406
Name:  ? Glyma.13G140600 Secondary Identifier:  ? PAC:30501970
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G140600 0.5kb upstream 0.5kb upstream 4541 true Chr13: 25308345-25312885 Glycine max
Glyma.13G140600 0.5kb upstream 0.5kb upstream 500 false Chr13: 25312386-25312885 Glycine max
Glyma.13G140600 0.5kb downstream 0.5kb downstream 4541 true Chr13: 25307845-25312385 Glycine max
Glyma.13G140600 0.5kb downstream 0.5kb downstream 500 false Chr13: 25307845-25308344 Glycine max
Glyma.13G140600 1.0kb upstream 1.0kb upstream 5041 true Chr13: 25308345-25313385 Glycine max
Glyma.13G140600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25312386-25313385 Glycine max
Glyma.13G140600 1.0kb downstream 1.0kb downstream 5041 true Chr13: 25307345-25312385 Glycine max
Glyma.13G140600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25307345-25308344 Glycine max
Glyma.13G140600 2.0kb upstream 2.0kb upstream 6041 true Chr13: 25308345-25314385 Glycine max
Glyma.13G140600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25312386-25314385 Glycine max
Glyma.13G140600 2.0kb downstream 2.0kb downstream 6041 true Chr13: 25306345-25312385 Glycine max
Glyma.13G140600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25306345-25308344 Glycine max
Glyma.13G140600 5.0kb upstream 5.0kb upstream 9041 true Chr13: 25308345-25317385 Glycine max
Glyma.13G140600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25312386-25317385 Glycine max
Glyma.13G140600 5.0kb downstream 5.0kb downstream 9041 true Chr13: 25303345-25312385 Glycine max
Glyma.13G140600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25303345-25308344 Glycine max
Glyma.13G140600 10.0kb upstream 10.0kb upstream 14041 true Chr13: 25308345-25322385 Glycine max
Glyma.13G140600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25312386-25322385 Glycine max
Glyma.13G140600 10.0kb downstream 10.0kb downstream 14041 true Chr13: 25298345-25312385 Glycine max
Glyma.13G140600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25298345-25308344 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298874 5265 Fabidae View MSA
124036629 5270 Rosid View MSA
123753340 5271 Pentapetalae View MSA
122797865 5272 Eudicot View MSA
122051660 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.08468 0.0 17.0671   High
cufflinks 2.82168 0.0 11.2244    
cufflinks 1.3334 0.0 6.67595   Low
cufflinks 2.78188 0.0 11.1093    
cufflinks 3.09768 0.0 12.0385    
cufflinks 1.60996 0.0 7.62336    
cufflinks 1.56345 0.0 7.50484    
cufflinks 2.18734 0.0 9.42119    
cufflinks 1.33202 0.0 6.6595   Low
cufflinks 0.68        
cufflinks 0.169       Low
cufflinks 0.697        
cufflinks 0.94        
cufflinks 1.412       High
cufflinks 0.383        
cufflinks 0.948        
cufflinks 0.482        
cufflinks 1.054        
cufflinks 1.538       High
cufflinks 0.751        
cufflinks 0.118       Low
cufflinks 1.074        
cufflinks 0.971        
cufflinks 0.176       Low
cufflinks 0.773        
cufflinks 0.254       Low

0 Strain