Gene : Glyma.13G128900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  1289
Name:  ? Glyma.13G128900 Secondary Identifier:  ? PAC:30500185
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G128900 0.5kb upstream 0.5kb upstream 3367 true Chr13: 24209250-24212616 Glycine max
Glyma.13G128900 0.5kb upstream 0.5kb upstream 500 false Chr13: 24209250-24209749 Glycine max
Glyma.13G128900 0.5kb downstream 0.5kb downstream 3367 true Chr13: 24209750-24213116 Glycine max
Glyma.13G128900 0.5kb downstream 0.5kb downstream 500 false Chr13: 24212617-24213116 Glycine max
Glyma.13G128900 1.0kb upstream 1.0kb upstream 3867 true Chr13: 24208750-24212616 Glycine max
Glyma.13G128900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24208750-24209749 Glycine max
Glyma.13G128900 1.0kb downstream 1.0kb downstream 3867 true Chr13: 24209750-24213616 Glycine max
Glyma.13G128900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24212617-24213616 Glycine max
Glyma.13G128900 2.0kb upstream 2.0kb upstream 4867 true Chr13: 24207750-24212616 Glycine max
Glyma.13G128900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24207750-24209749 Glycine max
Glyma.13G128900 2.0kb downstream 2.0kb downstream 4867 true Chr13: 24209750-24214616 Glycine max
Glyma.13G128900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24212617-24214616 Glycine max
Glyma.13G128900 5.0kb upstream 5.0kb upstream 7867 true Chr13: 24204750-24212616 Glycine max
Glyma.13G128900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24204750-24209749 Glycine max
Glyma.13G128900 5.0kb downstream 5.0kb downstream 7867 true Chr13: 24209750-24217616 Glycine max
Glyma.13G128900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24212617-24217616 Glycine max
Glyma.13G128900 10.0kb upstream 10.0kb upstream 12867 true Chr13: 24199750-24212616 Glycine max
Glyma.13G128900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24199750-24209749 Glycine max
Glyma.13G128900 10.0kb downstream 10.0kb downstream 12867 true Chr13: 24209750-24222616 Glycine max
Glyma.13G128900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24212617-24222616 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122308428 5265 Fabidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5847 0.0 106.74 High High
cufflinks 18.2558 0.0 90.5685    
cufflinks 10.4248 0.0 56.4567   Low
cufflinks 13.9263 0.0 68.1429    
cufflinks 13.9677 0.0 68.5339    
cufflinks 13.5551 0.0 73.1105    
cufflinks 10.0656 0.0 46.4064   Low
cufflinks 19.0914 0.0 85.6545    
cufflinks 15.0676 0.0 72.0141    
cufflinks 0.791        
cufflinks 0.263       Low
cufflinks 0.733        
cufflinks 0.893        
cufflinks 0.851        
cufflinks 0.453        
cufflinks 1.203       High
cufflinks 0.415       Low
cufflinks 0.815        
cufflinks 0.974        
cufflinks 1.181       High
cufflinks 0.341       Low
cufflinks 1.2       High
cufflinks 1.142        
cufflinks 0.369       Low
cufflinks 1.157        
cufflinks 0.411       Low

0 Strain