Gene : Glyma.13G129800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19282:SF227 - TETRASPANIN-18-RELATED Genomic Order:  1298
Name:  ? Glyma.13G129800 Secondary Identifier:  ? PAC:30504536
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G129800 0.5kb upstream 0.5kb upstream 5398 true Chr13: 24255740-24261137 Glycine max
Glyma.13G129800 0.5kb upstream 0.5kb upstream 500 false Chr13: 24260638-24261137 Glycine max
Glyma.13G129800 0.5kb downstream 0.5kb downstream 5398 true Chr13: 24255240-24260637 Glycine max
Glyma.13G129800 0.5kb downstream 0.5kb downstream 500 false Chr13: 24255240-24255739 Glycine max
Glyma.13G129800 1.0kb upstream 1.0kb upstream 5898 true Chr13: 24255740-24261637 Glycine max
Glyma.13G129800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24260638-24261637 Glycine max
Glyma.13G129800 1.0kb downstream 1.0kb downstream 5898 true Chr13: 24254740-24260637 Glycine max
Glyma.13G129800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24254740-24255739 Glycine max
Glyma.13G129800 2.0kb upstream 2.0kb upstream 6898 true Chr13: 24255740-24262637 Glycine max
Glyma.13G129800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24260638-24262637 Glycine max
Glyma.13G129800 2.0kb downstream 2.0kb downstream 6898 true Chr13: 24253740-24260637 Glycine max
Glyma.13G129800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24253740-24255739 Glycine max
Glyma.13G129800 5.0kb upstream 5.0kb upstream 9898 true Chr13: 24255740-24265637 Glycine max
Glyma.13G129800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24260638-24265637 Glycine max
Glyma.13G129800 5.0kb downstream 5.0kb downstream 9898 true Chr13: 24250740-24260637 Glycine max
Glyma.13G129800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24250740-24255739 Glycine max
Glyma.13G129800 10.0kb upstream 10.0kb upstream 14898 true Chr13: 24255740-24270637 Glycine max
Glyma.13G129800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24260638-24270637 Glycine max
Glyma.13G129800 10.0kb downstream 10.0kb downstream 14898 true Chr13: 24245740-24260637 Glycine max
Glyma.13G129800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24245740-24255739 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303734 5265 Fabidae View MSA
124063640 5270 Rosid View MSA
123743956 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.56026 0.0 24.1826    
cufflinks 8.76481 0.0 24.6665    
cufflinks 11.0534 0.0 30.3802    
cufflinks 18.1404 0.0 48.6253   High
cufflinks 9.00796 0.0 25.3167    
cufflinks 14.1007 0.0 38.2139    
cufflinks 6.36697 0.0 18.6573   Low
cufflinks 19.8744 0.0 53.1443   High
cufflinks 11.006 0.0 30.3214    
cufflinks 4.484       High
cufflinks 0.626       Low
cufflinks 3.153        
cufflinks 3.266        
cufflinks 1.809        
cufflinks 0.602       Low
cufflinks 2.561        
cufflinks 1.65        
cufflinks 5.226       High
cufflinks 2.62        
cufflinks 2.272        
cufflinks 0.841       Low
cufflinks 2.695        
cufflinks 3.571        
cufflinks 0.811       Low
cufflinks 2.508        
cufflinks 1.357        

0 Strain