Gene : Glyma.13G131100 G. max Wm82.a2.v1
Defline:  (1 of 3) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  1311
Name:  ? Glyma.13G131100 Secondary Identifier:  ? PAC:30505699
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G131100 0.5kb upstream 0.5kb upstream 5850 true Chr13: 24376793-24382642 Glycine max
Glyma.13G131100 0.5kb upstream 0.5kb upstream 500 false Chr13: 24376793-24377292 Glycine max
Glyma.13G131100 0.5kb downstream 0.5kb downstream 5850 true Chr13: 24377293-24383142 Glycine max
Glyma.13G131100 0.5kb downstream 0.5kb downstream 500 false Chr13: 24382643-24383142 Glycine max
Glyma.13G131100 1.0kb upstream 1.0kb upstream 6350 true Chr13: 24376293-24382642 Glycine max
Glyma.13G131100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24376293-24377292 Glycine max
Glyma.13G131100 1.0kb downstream 1.0kb downstream 6350 true Chr13: 24377293-24383642 Glycine max
Glyma.13G131100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24382643-24383642 Glycine max
Glyma.13G131100 2.0kb upstream 2.0kb upstream 7350 true Chr13: 24375293-24382642 Glycine max
Glyma.13G131100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24375293-24377292 Glycine max
Glyma.13G131100 2.0kb downstream 2.0kb downstream 7350 true Chr13: 24377293-24384642 Glycine max
Glyma.13G131100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24382643-24384642 Glycine max
Glyma.13G131100 5.0kb upstream 5.0kb upstream 10350 true Chr13: 24372293-24382642 Glycine max
Glyma.13G131100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24372293-24377292 Glycine max
Glyma.13G131100 5.0kb downstream 5.0kb downstream 10350 true Chr13: 24377293-24387642 Glycine max
Glyma.13G131100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24382643-24387642 Glycine max
Glyma.13G131100 10.0kb upstream 10.0kb upstream 15350 true Chr13: 24367293-24382642 Glycine max
Glyma.13G131100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24367293-24377292 Glycine max
Glyma.13G131100 10.0kb downstream 10.0kb downstream 15350 true Chr13: 24377293-24392642 Glycine max
Glyma.13G131100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24382643-24392642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310431 5265 Fabidae View MSA
124066447 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.860876 0.0 3.82027   Low
cufflinks 3.51586 0.0 14.5305   High
cufflinks 1.60528 0.0 9.19608    
cufflinks 1.73505 0.0 6.46129    
cufflinks 1.77188 0.0 6.38453    
cufflinks 1.2544 0.0 7.22598    
cufflinks 2.33809 0.0 11.7075    
cufflinks 1.60087 0.0 8.34419    
cufflinks 2.04824 0.0 7.08973    
cufflinks 0.252        
cufflinks 0.208        
cufflinks 0.391        
cufflinks 0.406        
cufflinks 0.396        
cufflinks 0.191       Low
cufflinks 0.38        
cufflinks 0.229        
cufflinks 0.33        
cufflinks 1.108       High
cufflinks 0.237        
cufflinks 0.173       Low
cufflinks 0.361        
cufflinks 0.784       High
cufflinks 0.236        
cufflinks 0.276        
cufflinks 0.28        

0 Strain