Gene : Glyma.13G133900 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR13872 - 60S RIBOSOMAL PROTEIN L35 Genomic Order:  1339
Name:  ? Glyma.13G133900 Secondary Identifier:  ? PAC:30502303
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G133900 0.5kb upstream 0.5kb upstream 2786 true Chr13: 24613343-24616128 Glycine max
Glyma.13G133900 0.5kb upstream 0.5kb upstream 500 false Chr13: 24613343-24613842 Glycine max
Glyma.13G133900 0.5kb downstream 0.5kb downstream 2786 true Chr13: 24613843-24616628 Glycine max
Glyma.13G133900 0.5kb downstream 0.5kb downstream 500 false Chr13: 24616129-24616628 Glycine max
Glyma.13G133900 1.0kb upstream 1.0kb upstream 3286 true Chr13: 24612843-24616128 Glycine max
Glyma.13G133900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24612843-24613842 Glycine max
Glyma.13G133900 1.0kb downstream 1.0kb downstream 3286 true Chr13: 24613843-24617128 Glycine max
Glyma.13G133900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24616129-24617128 Glycine max
Glyma.13G133900 2.0kb upstream 2.0kb upstream 4286 true Chr13: 24611843-24616128 Glycine max
Glyma.13G133900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24611843-24613842 Glycine max
Glyma.13G133900 2.0kb downstream 2.0kb downstream 4286 true Chr13: 24613843-24618128 Glycine max
Glyma.13G133900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24616129-24618128 Glycine max
Glyma.13G133900 5.0kb upstream 5.0kb upstream 7286 true Chr13: 24608843-24616128 Glycine max
Glyma.13G133900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24608843-24613842 Glycine max
Glyma.13G133900 5.0kb downstream 5.0kb downstream 7286 true Chr13: 24613843-24621128 Glycine max
Glyma.13G133900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24616129-24621128 Glycine max
Glyma.13G133900 10.0kb upstream 10.0kb upstream 12286 true Chr13: 24603843-24616128 Glycine max
Glyma.13G133900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24603843-24613842 Glycine max
Glyma.13G133900 10.0kb downstream 10.0kb downstream 12286 true Chr13: 24613843-24626128 Glycine max
Glyma.13G133900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24616129-24626128 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313417 5265 Fabidae View MSA
124074061 5270 Rosid View MSA
123744654 5271 Pentapetalae View MSA
122786708 5272 Eudicot View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.47 0.0 66.6922 High  
cufflinks 52.2733 0.0 139.535 High  
cufflinks 14.0407 0.0 40.3699   Low
cufflinks 18.705 0.0 51.9703   Low
cufflinks 83.4226 0.0 227.403 High High
cufflinks 69.9009 0.0 188.29 High High
cufflinks 29.3911 0.0 79.1955 High  
cufflinks 33.148 0.0 88.9658 High  
cufflinks 51.9441 0.0 138.695 High  
cufflinks 9.846     High  
cufflinks 1.426       Low
cufflinks 9.708     High  
cufflinks 39.482     High High
cufflinks 57.605     High High
cufflinks 0.63       Low
cufflinks 10.013     High  
cufflinks 4.208        
cufflinks 10.148     High  
cufflinks 17.897     High  
cufflinks 4.041        
cufflinks 3.059        
cufflinks 5.714        
cufflinks 14.487     High  
cufflinks 1.495       Low
cufflinks 6.605        
cufflinks 6.119        

0 Strain