Gene : Glyma.13G121300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31529:SF10 - LOB DOMAIN-CONTAINING PROTEIN 16 Genomic Order:  1213
Name:  ? Glyma.13G121300 Secondary Identifier:  ? PAC:30501703
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G121300 0.5kb upstream 0.5kb upstream 2544 true Chr13: 23423684-23426227 Glycine max
Glyma.13G121300 0.5kb upstream 0.5kb upstream 500 false Chr13: 23423684-23424183 Glycine max
Glyma.13G121300 0.5kb downstream 0.5kb downstream 2544 true Chr13: 23424184-23426727 Glycine max
Glyma.13G121300 0.5kb downstream 0.5kb downstream 500 false Chr13: 23426228-23426727 Glycine max
Glyma.13G121300 1.0kb upstream 1.0kb upstream 3044 true Chr13: 23423184-23426227 Glycine max
Glyma.13G121300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23423184-23424183 Glycine max
Glyma.13G121300 1.0kb downstream 1.0kb downstream 3044 true Chr13: 23424184-23427227 Glycine max
Glyma.13G121300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23426228-23427227 Glycine max
Glyma.13G121300 2.0kb upstream 2.0kb upstream 4044 true Chr13: 23422184-23426227 Glycine max
Glyma.13G121300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23422184-23424183 Glycine max
Glyma.13G121300 2.0kb downstream 2.0kb downstream 4044 true Chr13: 23424184-23428227 Glycine max
Glyma.13G121300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23426228-23428227 Glycine max
Glyma.13G121300 5.0kb upstream 5.0kb upstream 7044 true Chr13: 23419184-23426227 Glycine max
Glyma.13G121300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23419184-23424183 Glycine max
Glyma.13G121300 5.0kb downstream 5.0kb downstream 7044 true Chr13: 23424184-23431227 Glycine max
Glyma.13G121300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23426228-23431227 Glycine max
Glyma.13G121300 10.0kb upstream 10.0kb upstream 12044 true Chr13: 23414184-23426227 Glycine max
Glyma.13G121300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23414184-23424183 Glycine max
Glyma.13G121300 10.0kb downstream 10.0kb downstream 12044 true Chr13: 23424184-23436227 Glycine max
Glyma.13G121300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23426228-23436227 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313214 5265 Fabidae View MSA
124072898 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106944 0.0 0.483658 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.396093 0.0 1.61775    
cufflinks 0.0561039 0.0 0.269749 Low Low
cufflinks 0.668232 0.0 2.66288   High
cufflinks 0.395884 0.0 1.61858    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.100349 0.0 0.454177 Low  
cufflinks 0.102702 0.0 0.46452 Low  
cufflinks 0.412       High
cufflinks 0.082        
cufflinks 0.07     Low  
cufflinks 0.016     Low  
cufflinks 0.027     Low  
cufflinks 0.046     Low  
cufflinks 0.018     Low  
cufflinks 0.449       High
cufflinks 0.02     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.047     Low  
cufflinks 0.007     Low Low
cufflinks 0.204       High

0 Strain