Gene : Glyma.13G121400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31529:SF2 - LOB DOMAIN-CONTAINING PROTEIN 17-RELATED Genomic Order:  1214
Name:  ? Glyma.13G121400 Secondary Identifier:  ? PAC:30506077
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G121400 0.5kb upstream 0.5kb upstream 1775 true Chr13: 23429853-23431627 Glycine max
Glyma.13G121400 0.5kb upstream 0.5kb upstream 500 false Chr13: 23431128-23431627 Glycine max
Glyma.13G121400 0.5kb downstream 0.5kb downstream 1775 true Chr13: 23429353-23431127 Glycine max
Glyma.13G121400 0.5kb downstream 0.5kb downstream 500 false Chr13: 23429353-23429852 Glycine max
Glyma.13G121400 1.0kb upstream 1.0kb upstream 2275 true Chr13: 23429853-23432127 Glycine max
Glyma.13G121400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23431128-23432127 Glycine max
Glyma.13G121400 1.0kb downstream 1.0kb downstream 2275 true Chr13: 23428853-23431127 Glycine max
Glyma.13G121400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23428853-23429852 Glycine max
Glyma.13G121400 2.0kb upstream 2.0kb upstream 3275 true Chr13: 23429853-23433127 Glycine max
Glyma.13G121400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23431128-23433127 Glycine max
Glyma.13G121400 2.0kb downstream 2.0kb downstream 3275 true Chr13: 23427853-23431127 Glycine max
Glyma.13G121400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23427853-23429852 Glycine max
Glyma.13G121400 5.0kb upstream 5.0kb upstream 6275 true Chr13: 23429853-23436127 Glycine max
Glyma.13G121400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23431128-23436127 Glycine max
Glyma.13G121400 5.0kb downstream 5.0kb downstream 6275 true Chr13: 23424853-23431127 Glycine max
Glyma.13G121400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23424853-23429852 Glycine max
Glyma.13G121400 10.0kb upstream 10.0kb upstream 11275 true Chr13: 23429853-23441127 Glycine max
Glyma.13G121400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23431128-23441127 Glycine max
Glyma.13G121400 10.0kb downstream 10.0kb downstream 11275 true Chr13: 23419853-23431127 Glycine max
Glyma.13G121400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23419853-23429852 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029797 5273 Angiosperm View MSA
122313748 5265 Fabidae View MSA
124062010 5270 Rosid View MSA
123741408 5271 Pentapetalae View MSA
122794456 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.810838 0.0 3.03122    
cufflinks 0.420468 0.0 1.61823    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0241323 0.0 0.109222 Low Low
cufflinks 0.719851 0.0 2.70442    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.511        
cufflinks 0.92       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.368        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.591        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.371        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.36        

0 Strain