Gene : Glyma.13G122200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13038 - APG9 AUTOPHAGY 9 Genomic Order:  1222
Name:  ? Glyma.13G122200 Secondary Identifier:  ? PAC:30504602
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G122200 0.5kb upstream 0.5kb upstream 6535 true Chr13: 23508826-23515360 Glycine max
Glyma.13G122200 0.5kb upstream 0.5kb upstream 500 false Chr13: 23508826-23509325 Glycine max
Glyma.13G122200 0.5kb downstream 0.5kb downstream 6535 true Chr13: 23509326-23515860 Glycine max
Glyma.13G122200 0.5kb downstream 0.5kb downstream 500 false Chr13: 23515361-23515860 Glycine max
Glyma.13G122200 1.0kb upstream 1.0kb upstream 7035 true Chr13: 23508326-23515360 Glycine max
Glyma.13G122200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23508326-23509325 Glycine max
Glyma.13G122200 1.0kb downstream 1.0kb downstream 7035 true Chr13: 23509326-23516360 Glycine max
Glyma.13G122200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23515361-23516360 Glycine max
Glyma.13G122200 2.0kb upstream 2.0kb upstream 8035 true Chr13: 23507326-23515360 Glycine max
Glyma.13G122200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23507326-23509325 Glycine max
Glyma.13G122200 2.0kb downstream 2.0kb downstream 8035 true Chr13: 23509326-23517360 Glycine max
Glyma.13G122200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23515361-23517360 Glycine max
Glyma.13G122200 5.0kb upstream 5.0kb upstream 11035 true Chr13: 23504326-23515360 Glycine max
Glyma.13G122200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23504326-23509325 Glycine max
Glyma.13G122200 5.0kb downstream 5.0kb downstream 11035 true Chr13: 23509326-23520360 Glycine max
Glyma.13G122200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23515361-23520360 Glycine max
Glyma.13G122200 10.0kb upstream 10.0kb upstream 16035 true Chr13: 23499326-23515360 Glycine max
Glyma.13G122200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23499326-23509325 Glycine max
Glyma.13G122200 10.0kb downstream 10.0kb downstream 16035 true Chr13: 23509326-23525360 Glycine max
Glyma.13G122200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23515361-23525360 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.09921 0.0 18.6772    
cufflinks 2.16799 0.0 8.37357    
cufflinks 13.7085 0.0 47.8689   High
cufflinks 1.97061 0.0 7.95882    
cufflinks 1.25477 0.0 4.48354   Low
cufflinks 3.38545 0.0 11.5543    
cufflinks 2.88779 0.0 10.3499    
cufflinks 1.79384 0.0 5.58139    
cufflinks 1.93163 0.0 5.91622    
cufflinks 1.338        
cufflinks 3.36       High
cufflinks 2.46        
cufflinks 0.775       Low
cufflinks 0.466       Low
cufflinks 1.213        
cufflinks 1.342        
cufflinks 4.049       High
cufflinks 1.24        
cufflinks 0.997        
cufflinks 1.306        
cufflinks 1.834        
cufflinks 1.539        
cufflinks 1.253        
cufflinks 3.724       High
cufflinks 1.104        
cufflinks 5.322       High

0 Strain