Gene : Glyma.13G122600 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1226
Name:  ? Glyma.13G122600 Secondary Identifier:  ? PAC:30501360
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G122600 0.5kb upstream 0.5kb upstream 1224 true Chr13: 23543781-23545004 Glycine max
Glyma.13G122600 0.5kb upstream 0.5kb upstream 500 false Chr13: 23543781-23544280 Glycine max
Glyma.13G122600 0.5kb downstream 0.5kb downstream 1224 true Chr13: 23544281-23545504 Glycine max
Glyma.13G122600 0.5kb downstream 0.5kb downstream 500 false Chr13: 23545005-23545504 Glycine max
Glyma.13G122600 1.0kb upstream 1.0kb upstream 1724 true Chr13: 23543281-23545004 Glycine max
Glyma.13G122600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23543281-23544280 Glycine max
Glyma.13G122600 1.0kb downstream 1.0kb downstream 1724 true Chr13: 23544281-23546004 Glycine max
Glyma.13G122600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23545005-23546004 Glycine max
Glyma.13G122600 2.0kb upstream 2.0kb upstream 2724 true Chr13: 23542281-23545004 Glycine max
Glyma.13G122600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23542281-23544280 Glycine max
Glyma.13G122600 2.0kb downstream 2.0kb downstream 2724 true Chr13: 23544281-23547004 Glycine max
Glyma.13G122600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23545005-23547004 Glycine max
Glyma.13G122600 5.0kb upstream 5.0kb upstream 5724 true Chr13: 23539281-23545004 Glycine max
Glyma.13G122600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23539281-23544280 Glycine max
Glyma.13G122600 5.0kb downstream 5.0kb downstream 5724 true Chr13: 23544281-23550004 Glycine max
Glyma.13G122600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23545005-23550004 Glycine max
Glyma.13G122600 10.0kb upstream 10.0kb upstream 10724 true Chr13: 23534281-23545004 Glycine max
Glyma.13G122600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23534281-23544280 Glycine max
Glyma.13G122600 10.0kb downstream 10.0kb downstream 10724 true Chr13: 23544281-23555004 Glycine max
Glyma.13G122600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23545005-23555004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297843 5265 Fabidae View MSA
124040463 5270 Rosid View MSA
123747853 5271 Pentapetalae View MSA
122772336 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.172065 0.0 0.687419 Low  
cufflinks 0.0150058 0.0 0.0721483 Low Low
cufflinks 0.234796 0.0 0.928197    
cufflinks 0.367246 0.0 1.42881    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.163513 0.0 0.654624 Low  
cufflinks 0.102       Low
cufflinks 0.234        
cufflinks 0.26        
cufflinks 0.135        
cufflinks 0.469       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.115        
cufflinks 0.358       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.154        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.149        

0 Strain