Gene : Glyma.13G123400 G. max Wm82.a2.v1
Defline:  (1 of 13) KOG4249 - Uncharacterized conserved protein Genomic Order:  1234
Name:  ? Glyma.13G123400 Secondary Identifier:  ? PAC:30501305
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G123400 0.5kb upstream 0.5kb upstream 4357 true Chr13: 23656753-23661109 Glycine max
Glyma.13G123400 0.5kb upstream 0.5kb upstream 500 false Chr13: 23656753-23657252 Glycine max
Glyma.13G123400 0.5kb downstream 0.5kb downstream 4357 true Chr13: 23657253-23661609 Glycine max
Glyma.13G123400 0.5kb downstream 0.5kb downstream 500 false Chr13: 23661110-23661609 Glycine max
Glyma.13G123400 1.0kb upstream 1.0kb upstream 4857 true Chr13: 23656253-23661109 Glycine max
Glyma.13G123400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23656253-23657252 Glycine max
Glyma.13G123400 1.0kb downstream 1.0kb downstream 4857 true Chr13: 23657253-23662109 Glycine max
Glyma.13G123400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23661110-23662109 Glycine max
Glyma.13G123400 2.0kb upstream 2.0kb upstream 5857 true Chr13: 23655253-23661109 Glycine max
Glyma.13G123400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23655253-23657252 Glycine max
Glyma.13G123400 2.0kb downstream 2.0kb downstream 5857 true Chr13: 23657253-23663109 Glycine max
Glyma.13G123400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23661110-23663109 Glycine max
Glyma.13G123400 5.0kb upstream 5.0kb upstream 8857 true Chr13: 23652253-23661109 Glycine max
Glyma.13G123400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23652253-23657252 Glycine max
Glyma.13G123400 5.0kb downstream 5.0kb downstream 8857 true Chr13: 23657253-23666109 Glycine max
Glyma.13G123400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23661110-23666109 Glycine max
Glyma.13G123400 10.0kb upstream 10.0kb upstream 13857 true Chr13: 23647253-23661109 Glycine max
Glyma.13G123400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23647253-23657252 Glycine max
Glyma.13G123400 10.0kb downstream 10.0kb downstream 13857 true Chr13: 23657253-23671109 Glycine max
Glyma.13G123400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23661110-23671109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310912 5265 Fabidae View MSA
124063079 5270 Rosid View MSA
123739166 5271 Pentapetalae View MSA
122791185 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3875 0.0 30.8735   High
cufflinks 6.57568 0.0 18.6564    
cufflinks 6.58647 0.0 18.6184    
cufflinks 4.62084 0.0 13.6887    
cufflinks 3.43918 0.0 10.63   Low
cufflinks 5.2941 0.0 15.4015    
cufflinks 6.01011 0.0 17.2332    
cufflinks 4.28227 0.0 12.8224    
cufflinks 4.33909 0.0 12.9633    
cufflinks 1.113       Low
cufflinks 1.79        
cufflinks 3.692        
cufflinks 1.403        
cufflinks 1.8        
cufflinks 1.328       Low
cufflinks 4.512        
cufflinks 1.251       Low
cufflinks 3.405        
cufflinks 3.422        
cufflinks 6.388       High
cufflinks 1.513        
cufflinks 5.606       High
cufflinks 4.793       High
cufflinks 2.07        
cufflinks 4.926       High
cufflinks 1.532        

0 Strain