Gene : Glyma.13G123700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18937:SF177 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 1 Genomic Order:  1237
Name:  ? Glyma.13G123700 Secondary Identifier:  ? PAC:30505176
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G123700 0.5kb upstream 0.5kb upstream 11969 true Chr13: 23686296-23698264 Glycine max
Glyma.13G123700 0.5kb upstream 0.5kb upstream 500 false Chr13: 23697765-23698264 Glycine max
Glyma.13G123700 0.5kb downstream 0.5kb downstream 11969 true Chr13: 23685796-23697764 Glycine max
Glyma.13G123700 0.5kb downstream 0.5kb downstream 500 false Chr13: 23685796-23686295 Glycine max
Glyma.13G123700 1.0kb upstream 1.0kb upstream 12469 true Chr13: 23686296-23698764 Glycine max
Glyma.13G123700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23697765-23698764 Glycine max
Glyma.13G123700 1.0kb downstream 1.0kb downstream 12469 true Chr13: 23685296-23697764 Glycine max
Glyma.13G123700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23685296-23686295 Glycine max
Glyma.13G123700 2.0kb upstream 2.0kb upstream 13469 true Chr13: 23686296-23699764 Glycine max
Glyma.13G123700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23697765-23699764 Glycine max
Glyma.13G123700 2.0kb downstream 2.0kb downstream 13469 true Chr13: 23684296-23697764 Glycine max
Glyma.13G123700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23684296-23686295 Glycine max
Glyma.13G123700 5.0kb upstream 5.0kb upstream 16469 true Chr13: 23686296-23702764 Glycine max
Glyma.13G123700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23697765-23702764 Glycine max
Glyma.13G123700 5.0kb downstream 5.0kb downstream 16469 true Chr13: 23681296-23697764 Glycine max
Glyma.13G123700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23681296-23686295 Glycine max
Glyma.13G123700 10.0kb upstream 10.0kb upstream 21469 true Chr13: 23686296-23707764 Glycine max
Glyma.13G123700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23697765-23707764 Glycine max
Glyma.13G123700 10.0kb downstream 10.0kb downstream 21469 true Chr13: 23676296-23697764 Glycine max
Glyma.13G123700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23676296-23686295 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041050 5273 Angiosperm View MSA
122312234 5265 Fabidae View MSA
124066334 5270 Rosid View MSA
123740153 5271 Pentapetalae View MSA
122789299 5272 Eudicot View MSA
121345336 5274 Embryophyte View MSA
123424824 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.32415 0.0 22.2728   High
cufflinks 7.5823 0.0 20.2521    
cufflinks 10.0204 0.0 27.0272   High
cufflinks 6.80591 0.0 18.1613    
cufflinks 4.74465 0.0 12.7292    
cufflinks 3.69481 0.0 10.0289   Low
cufflinks 4.92117 0.0 13.1956    
cufflinks 5.42363 0.0 14.4916    
cufflinks 4.996 0.0 13.3803    
cufflinks 2.543       Low
cufflinks 2.803        
cufflinks 5.551       High
cufflinks 2.998        
cufflinks 2.641       Low
cufflinks 2.658       Low
cufflinks 4.93        
cufflinks 1.991       Low
cufflinks 4.663        
cufflinks 5.858       High
cufflinks 4.227        
cufflinks 3.051        
cufflinks 5.141       High
cufflinks 5.306       High
cufflinks 3.471        
cufflinks 4.386        
cufflinks 3.683        

0 Strain