Gene : Glyma.13G124500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12847:SF3 - NECAP-LIKE PROTEIN CG9132 Genomic Order:  1245
Name:  ? Glyma.13G124500 Secondary Identifier:  ? PAC:30502698
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G124500 0.5kb upstream 0.5kb upstream 3034 true Chr13: 23798397-23801430 Glycine max
Glyma.13G124500 0.5kb upstream 0.5kb upstream 500 false Chr13: 23798397-23798896 Glycine max
Glyma.13G124500 0.5kb downstream 0.5kb downstream 3034 true Chr13: 23798897-23801930 Glycine max
Glyma.13G124500 0.5kb downstream 0.5kb downstream 500 false Chr13: 23801431-23801930 Glycine max
Glyma.13G124500 1.0kb upstream 1.0kb upstream 3534 true Chr13: 23797897-23801430 Glycine max
Glyma.13G124500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23797897-23798896 Glycine max
Glyma.13G124500 1.0kb downstream 1.0kb downstream 3534 true Chr13: 23798897-23802430 Glycine max
Glyma.13G124500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23801431-23802430 Glycine max
Glyma.13G124500 2.0kb upstream 2.0kb upstream 4534 true Chr13: 23796897-23801430 Glycine max
Glyma.13G124500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23796897-23798896 Glycine max
Glyma.13G124500 2.0kb downstream 2.0kb downstream 4534 true Chr13: 23798897-23803430 Glycine max
Glyma.13G124500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23801431-23803430 Glycine max
Glyma.13G124500 5.0kb upstream 5.0kb upstream 7534 true Chr13: 23793897-23801430 Glycine max
Glyma.13G124500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23793897-23798896 Glycine max
Glyma.13G124500 5.0kb downstream 5.0kb downstream 7534 true Chr13: 23798897-23806430 Glycine max
Glyma.13G124500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23801431-23806430 Glycine max
Glyma.13G124500 10.0kb upstream 10.0kb upstream 12534 true Chr13: 23788897-23801430 Glycine max
Glyma.13G124500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23788897-23798896 Glycine max
Glyma.13G124500 10.0kb downstream 10.0kb downstream 12534 true Chr13: 23798897-23811430 Glycine max
Glyma.13G124500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23801431-23811430 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300590 5265 Fabidae View MSA
124068673 5270 Rosid View MSA
123739095 5271 Pentapetalae View MSA
122787373 5272 Eudicot View MSA
122045557 5273 Angiosperm View MSA
121345773 5274 Embryophyte View MSA
123428646 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1443 0.0 38.0771    
cufflinks 11.9554 0.0 32.5303    
cufflinks 10.8281 0.0 29.7551   Low
cufflinks 28.3388 0.0 75.8484 High High
cufflinks 19.327 0.0 51.5679    
cufflinks 36.4525 0.0 98.728 High High
cufflinks 15.2024 0.0 40.7697    
cufflinks 20.3827 0.0 54.3946    
cufflinks 13.5784 0.0 36.6105    
cufflinks 10.189     High High
cufflinks 4.571        
cufflinks 5.038        
cufflinks 8.846     High High
cufflinks 7.384     High  
cufflinks 1.998       Low
cufflinks 4.494        
cufflinks 6.634     High  
cufflinks 7.205        
cufflinks 5.835        
cufflinks 3.795        
cufflinks 5.221        
cufflinks 4.005        
cufflinks 5.252        
cufflinks 6.082     High  
cufflinks 3.327       Low
cufflinks 5.217        

0 Strain