Gene : Glyma.13G125100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22957:SF299 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  1251
Name:  ? Glyma.13G125100 Secondary Identifier:  ? PAC:30500946
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G125100 0.5kb upstream 0.5kb upstream 7390 true Chr13: 23852556-23859945 Glycine max
Glyma.13G125100 0.5kb upstream 0.5kb upstream 500 false Chr13: 23852556-23853055 Glycine max
Glyma.13G125100 0.5kb downstream 0.5kb downstream 7390 true Chr13: 23853056-23860445 Glycine max
Glyma.13G125100 0.5kb downstream 0.5kb downstream 500 false Chr13: 23859946-23860445 Glycine max
Glyma.13G125100 1.0kb upstream 1.0kb upstream 7890 true Chr13: 23852056-23859945 Glycine max
Glyma.13G125100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 23852056-23853055 Glycine max
Glyma.13G125100 1.0kb downstream 1.0kb downstream 7890 true Chr13: 23853056-23860945 Glycine max
Glyma.13G125100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 23859946-23860945 Glycine max
Glyma.13G125100 2.0kb upstream 2.0kb upstream 8890 true Chr13: 23851056-23859945 Glycine max
Glyma.13G125100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 23851056-23853055 Glycine max
Glyma.13G125100 2.0kb downstream 2.0kb downstream 8890 true Chr13: 23853056-23861945 Glycine max
Glyma.13G125100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 23859946-23861945 Glycine max
Glyma.13G125100 5.0kb upstream 5.0kb upstream 11890 true Chr13: 23848056-23859945 Glycine max
Glyma.13G125100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 23848056-23853055 Glycine max
Glyma.13G125100 5.0kb downstream 5.0kb downstream 11890 true Chr13: 23853056-23864945 Glycine max
Glyma.13G125100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 23859946-23864945 Glycine max
Glyma.13G125100 10.0kb upstream 10.0kb upstream 16890 true Chr13: 23843056-23859945 Glycine max
Glyma.13G125100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 23843056-23853055 Glycine max
Glyma.13G125100 10.0kb downstream 10.0kb downstream 16890 true Chr13: 23853056-23869945 Glycine max
Glyma.13G125100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 23859946-23869945 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301675 5265 Fabidae View MSA
124067717 5270 Rosid View MSA
123747965 5271 Pentapetalae View MSA
122785951 5272 Eudicot View MSA
122051014 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.3838 0.0 106.852 High High
cufflinks 2.96858 0.0 15.5245   Low
cufflinks 4.19557 0.0 19.297    
cufflinks 4.35727 0.0 19.7428    
cufflinks 6.24235 0.0 26.3798    
cufflinks 15.5876 0.0 60.056   High
cufflinks 3.15713 0.0 16.3003    
cufflinks 4.65187 0.0 21.1273    
cufflinks 8.47722 0.0 33.8338    
cufflinks 0.555        
cufflinks 0.914       High
cufflinks 0.464        
cufflinks 1.005       High
cufflinks 0.702        
cufflinks 0.427        
cufflinks 0.501        
cufflinks 0.526        
cufflinks 0.493        
cufflinks 0.443        
cufflinks 0.403       Low
cufflinks 0.922       High
cufflinks 0.491        
cufflinks 0.639        
cufflinks 1.142       High
cufflinks 0.392       Low
cufflinks 1.048       High

0 Strain