Gene : Glyma.13G127500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24223:SF189 - ABC TRANSPORTER C FAMILY MEMBER 5 Genomic Order:  1275
Name:  ? Glyma.13G127500 Secondary Identifier:  ? PAC:30501043
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G127500 0.5kb upstream 0.5kb upstream 9757 true Chr13: 24041356-24051112 Glycine max
Glyma.13G127500 0.5kb upstream 0.5kb upstream 500 false Chr13: 24050613-24051112 Glycine max
Glyma.13G127500 0.5kb downstream 0.5kb downstream 9757 true Chr13: 24040856-24050612 Glycine max
Glyma.13G127500 0.5kb downstream 0.5kb downstream 500 false Chr13: 24040856-24041355 Glycine max
Glyma.13G127500 1.0kb upstream 1.0kb upstream 10257 true Chr13: 24041356-24051612 Glycine max
Glyma.13G127500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24050613-24051612 Glycine max
Glyma.13G127500 1.0kb downstream 1.0kb downstream 10257 true Chr13: 24040356-24050612 Glycine max
Glyma.13G127500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24040356-24041355 Glycine max
Glyma.13G127500 2.0kb upstream 2.0kb upstream 11257 true Chr13: 24041356-24052612 Glycine max
Glyma.13G127500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24050613-24052612 Glycine max
Glyma.13G127500 2.0kb downstream 2.0kb downstream 11257 true Chr13: 24039356-24050612 Glycine max
Glyma.13G127500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24039356-24041355 Glycine max
Glyma.13G127500 5.0kb upstream 5.0kb upstream 14257 true Chr13: 24041356-24055612 Glycine max
Glyma.13G127500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24050613-24055612 Glycine max
Glyma.13G127500 5.0kb downstream 5.0kb downstream 14257 true Chr13: 24036356-24050612 Glycine max
Glyma.13G127500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24036356-24041355 Glycine max
Glyma.13G127500 10.0kb upstream 10.0kb upstream 19257 true Chr13: 24041356-24060612 Glycine max
Glyma.13G127500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24050613-24060612 Glycine max
Glyma.13G127500 10.0kb downstream 10.0kb downstream 19257 true Chr13: 24031356-24050612 Glycine max
Glyma.13G127500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24031356-24041355 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310554 5265 Fabidae View MSA
124062318 5270 Rosid View MSA
123738711 5271 Pentapetalae View MSA
122797524 5272 Eudicot View MSA
122042254 5273 Angiosperm View MSA
121346064 5274 Embryophyte View MSA
123380316 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.2168 0.0 12.2046    
cufflinks 1.69428 0.0 7.36761   Low
cufflinks 32.4247 0.0 150.798 High High
cufflinks 5.34463 0.0 19.2983    
cufflinks 10.545 0.0 40.0076    
cufflinks 4.01136 0.0 14.5256    
cufflinks 3.64008 0.0 11.0732    
cufflinks 3.39936 0.0 12.555    
cufflinks 6.93513 0.0 24.9321    
cufflinks 2.319        
cufflinks 5.846     High  
cufflinks 17.636     High High
cufflinks 4.585        
cufflinks 4.415        
cufflinks 26.082     High High
cufflinks 4.045        
cufflinks 4.002        
cufflinks 9.136     High  
cufflinks 1.171       Low
cufflinks 2.914        
cufflinks 10.224     High  
cufflinks 3.362        
cufflinks 1.909       Low
cufflinks 4.422        
cufflinks 2.725        
cufflinks 8.606     High  

0 Strain