Gene : Glyma.13G171100 G. max Wm82.a2.v1
Genomic Order:  1711 Name:  ? Glyma.13G171100
Secondary Identifier:  ? PAC:30500079
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G171100 0.5kb upstream 0.5kb upstream 4416 true Chr13: 28518633-28523048 Glycine max
Glyma.13G171100 0.5kb upstream 0.5kb upstream 500 false Chr13: 28522549-28523048 Glycine max
Glyma.13G171100 0.5kb downstream 0.5kb downstream 4416 true Chr13: 28518133-28522548 Glycine max
Glyma.13G171100 0.5kb downstream 0.5kb downstream 500 false Chr13: 28518133-28518632 Glycine max
Glyma.13G171100 1.0kb upstream 1.0kb upstream 4916 true Chr13: 28518633-28523548 Glycine max
Glyma.13G171100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28522549-28523548 Glycine max
Glyma.13G171100 1.0kb downstream 1.0kb downstream 4916 true Chr13: 28517633-28522548 Glycine max
Glyma.13G171100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28517633-28518632 Glycine max
Glyma.13G171100 2.0kb upstream 2.0kb upstream 5916 true Chr13: 28518633-28524548 Glycine max
Glyma.13G171100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28522549-28524548 Glycine max
Glyma.13G171100 2.0kb downstream 2.0kb downstream 5916 true Chr13: 28516633-28522548 Glycine max
Glyma.13G171100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28516633-28518632 Glycine max
Glyma.13G171100 5.0kb upstream 5.0kb upstream 8916 true Chr13: 28518633-28527548 Glycine max
Glyma.13G171100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28522549-28527548 Glycine max
Glyma.13G171100 5.0kb downstream 5.0kb downstream 8916 true Chr13: 28513633-28522548 Glycine max
Glyma.13G171100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28513633-28518632 Glycine max
Glyma.13G171100 10.0kb upstream 10.0kb upstream 13916 true Chr13: 28518633-28532548 Glycine max
Glyma.13G171100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28522549-28532548 Glycine max
Glyma.13G171100 10.0kb downstream 10.0kb downstream 13916 true Chr13: 28508633-28522548 Glycine max
Glyma.13G171100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28508633-28518632 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040940 5273 Angiosperm View MSA
122308885 5265 Fabidae View MSA
124067183 5270 Rosid View MSA
123746963 5271 Pentapetalae View MSA
122786098 5272 Eudicot View MSA
121309774 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.89062 0.0 10.9329    
cufflinks 13.1564 0.0 35.1528   High
cufflinks 4.03922 0.0 11.3728    
cufflinks 5.60762 0.0 15.3038    
cufflinks 3.26263 0.0 9.31211    
cufflinks 1.76745 0.0 5.50289   Low
cufflinks 6.42594 0.0 17.3817    
cufflinks 4.01975 0.0 11.2815    
cufflinks 5.8342 0.0 15.8671    
cufflinks 2.501        
cufflinks 0.242       Low
cufflinks 4.795        
cufflinks 2.083        
cufflinks 3.307        
cufflinks 0.227       Low
cufflinks 12.344     High High
cufflinks 0.603        
cufflinks 7.793     High  
cufflinks 10.126     High  
cufflinks 14.009     High High
cufflinks 0.392       Low
cufflinks 13.181     High High
cufflinks 10.933     High  
cufflinks 0.162       Low
cufflinks 12.265     High High
cufflinks 0.625        

0 Strain