Gene : Glyma.13G171400 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR33869:SF1 - CLAVATA3/ESR (CLE)-RELATED PROTEIN 1-RELATED Genomic Order:  1714
Name:  ? Glyma.13G171400 Secondary Identifier:  ? PAC:30501792
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G171400 0.5kb upstream 0.5kb upstream 1131 true Chr13: 28559073-28560203 Glycine max
Glyma.13G171400 0.5kb upstream 0.5kb upstream 500 false Chr13: 28559704-28560203 Glycine max
Glyma.13G171400 0.5kb downstream 0.5kb downstream 1131 true Chr13: 28558573-28559703 Glycine max
Glyma.13G171400 0.5kb downstream 0.5kb downstream 500 false Chr13: 28558573-28559072 Glycine max
Glyma.13G171400 1.0kb upstream 1.0kb upstream 1631 true Chr13: 28559073-28560703 Glycine max
Glyma.13G171400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28559704-28560703 Glycine max
Glyma.13G171400 1.0kb downstream 1.0kb downstream 1631 true Chr13: 28558073-28559703 Glycine max
Glyma.13G171400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28558073-28559072 Glycine max
Glyma.13G171400 2.0kb upstream 2.0kb upstream 2631 true Chr13: 28559073-28561703 Glycine max
Glyma.13G171400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28559704-28561703 Glycine max
Glyma.13G171400 2.0kb downstream 2.0kb downstream 2631 true Chr13: 28557073-28559703 Glycine max
Glyma.13G171400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28557073-28559072 Glycine max
Glyma.13G171400 5.0kb upstream 5.0kb upstream 5631 true Chr13: 28559073-28564703 Glycine max
Glyma.13G171400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28559704-28564703 Glycine max
Glyma.13G171400 5.0kb downstream 5.0kb downstream 5631 true Chr13: 28554073-28559703 Glycine max
Glyma.13G171400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28554073-28559072 Glycine max
Glyma.13G171400 10.0kb upstream 10.0kb upstream 10631 true Chr13: 28559073-28569703 Glycine max
Glyma.13G171400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28559704-28569703 Glycine max
Glyma.13G171400 10.0kb downstream 10.0kb downstream 10631 true Chr13: 28549073-28559703 Glycine max
Glyma.13G171400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28549073-28559072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792096 5273 Angiosperm View MSA
122298498 5265 Fabidae View MSA
124039787 5270 Rosid View MSA
123746413 5271 Pentapetalae View MSA
122796359 5272 Eudicot View MSA
121063350 5274 Embryophyte View MSA
123103107 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.190158 0.0 0.774668 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0558484 0.0 0.247203 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.77949 0.0 10.0234    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.16498 0.0 20.7262   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 179.365     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.074     Low  
cufflinks 0.423        
cufflinks 82.208     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 61.889     High  
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 138.176     High High
cufflinks 0.046     Low Low
cufflinks 16.766     High  

0 Strain