Gene : Glyma.13G172900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33873:SF1 - TRANSCRIPTION FACTOR VOZ1 Genomic Order:  1729
Name:  ? Glyma.13G172900 Secondary Identifier:  ? PAC:30500893
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G172900 0.5kb upstream 0.5kb upstream 6752 true Chr13: 28697100-28703851 Glycine max
Glyma.13G172900 0.5kb upstream 0.5kb upstream 500 false Chr13: 28703352-28703851 Glycine max
Glyma.13G172900 0.5kb downstream 0.5kb downstream 6752 true Chr13: 28696600-28703351 Glycine max
Glyma.13G172900 0.5kb downstream 0.5kb downstream 500 false Chr13: 28696600-28697099 Glycine max
Glyma.13G172900 1.0kb upstream 1.0kb upstream 7252 true Chr13: 28697100-28704351 Glycine max
Glyma.13G172900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28703352-28704351 Glycine max
Glyma.13G172900 1.0kb downstream 1.0kb downstream 7252 true Chr13: 28696100-28703351 Glycine max
Glyma.13G172900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28696100-28697099 Glycine max
Glyma.13G172900 2.0kb upstream 2.0kb upstream 8252 true Chr13: 28697100-28705351 Glycine max
Glyma.13G172900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28703352-28705351 Glycine max
Glyma.13G172900 2.0kb downstream 2.0kb downstream 8252 true Chr13: 28695100-28703351 Glycine max
Glyma.13G172900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28695100-28697099 Glycine max
Glyma.13G172900 5.0kb upstream 5.0kb upstream 11252 true Chr13: 28697100-28708351 Glycine max
Glyma.13G172900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28703352-28708351 Glycine max
Glyma.13G172900 5.0kb downstream 5.0kb downstream 11252 true Chr13: 28692100-28703351 Glycine max
Glyma.13G172900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28692100-28697099 Glycine max
Glyma.13G172900 10.0kb upstream 10.0kb upstream 16252 true Chr13: 28697100-28713351 Glycine max
Glyma.13G172900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28703352-28713351 Glycine max
Glyma.13G172900 10.0kb downstream 10.0kb downstream 16252 true Chr13: 28687100-28703351 Glycine max
Glyma.13G172900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28687100-28697099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302285 5265 Fabidae View MSA
124066720 5270 Rosid View MSA
123737932 5271 Pentapetalae View MSA
122797844 5272 Eudicot View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.5505 0.0 43.5321   High
cufflinks 9.026 0.0 27.2444    
cufflinks 10.1687 0.0 30.4628    
cufflinks 9.62226 0.0 28.9072    
cufflinks 7.09234 0.0 21.9501   Low
cufflinks 8.42828 0.0 25.3944    
cufflinks 7.02089 0.0 21.6472   Low
cufflinks 13.4095 0.0 39.8674   High
cufflinks 8.27619 0.0 25.203    
cufflinks 4.504        
cufflinks 2.438       Low
cufflinks 3.892        
cufflinks 3.465        
cufflinks 3.39        
cufflinks 2.054       Low
cufflinks 4.111        
cufflinks 2.495       Low
cufflinks 4.678       High
cufflinks 5.004       High
cufflinks 4.331        
cufflinks 2.84        
cufflinks 4.501        
cufflinks 3.877        
cufflinks 3.436        
cufflinks 4.197        
cufflinks 2.659       Low

0 Strain