Gene : Glyma.13G175000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31621:SF0 - DUF679 DOMAIN MEMBRANE PROTEIN 7 Genomic Order:  1750
Name:  ? Glyma.13G175000 Secondary Identifier:  ? PAC:30506072
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G175000 0.5kb upstream 0.5kb upstream 1358 true Chr13: 28964456-28965813 Glycine max
Glyma.13G175000 0.5kb upstream 0.5kb upstream 500 false Chr13: 28964456-28964955 Glycine max
Glyma.13G175000 0.5kb downstream 0.5kb downstream 1358 true Chr13: 28964956-28966313 Glycine max
Glyma.13G175000 0.5kb downstream 0.5kb downstream 500 false Chr13: 28965814-28966313 Glycine max
Glyma.13G175000 1.0kb upstream 1.0kb upstream 1858 true Chr13: 28963956-28965813 Glycine max
Glyma.13G175000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28963956-28964955 Glycine max
Glyma.13G175000 1.0kb downstream 1.0kb downstream 1858 true Chr13: 28964956-28966813 Glycine max
Glyma.13G175000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28965814-28966813 Glycine max
Glyma.13G175000 2.0kb upstream 2.0kb upstream 2858 true Chr13: 28962956-28965813 Glycine max
Glyma.13G175000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28962956-28964955 Glycine max
Glyma.13G175000 2.0kb downstream 2.0kb downstream 2858 true Chr13: 28964956-28967813 Glycine max
Glyma.13G175000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28965814-28967813 Glycine max
Glyma.13G175000 5.0kb upstream 5.0kb upstream 5858 true Chr13: 28959956-28965813 Glycine max
Glyma.13G175000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28959956-28964955 Glycine max
Glyma.13G175000 5.0kb downstream 5.0kb downstream 5858 true Chr13: 28964956-28970813 Glycine max
Glyma.13G175000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28965814-28970813 Glycine max
Glyma.13G175000 10.0kb upstream 10.0kb upstream 10858 true Chr13: 28954956-28965813 Glycine max
Glyma.13G175000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28954956-28964955 Glycine max
Glyma.13G175000 10.0kb downstream 10.0kb downstream 10858 true Chr13: 28964956-28975813 Glycine max
Glyma.13G175000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28965814-28975813 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314184 5265 Fabidae View MSA
124071441 5270 Rosid View MSA
123744074 5271 Pentapetalae View MSA
122789461 5272 Eudicot View MSA
122044570 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.16194 0.0 0.653051 Low  
cufflinks 0.156525 0.0 0.632007 Low  
cufflinks 6.04533 0.0 19.4248   High
cufflinks 0.121681 0.0 0.496924 Low  
cufflinks 0.189857 0.0 0.760366 Low  
cufflinks 0.353081 0.0 1.38194    
cufflinks 0.0556166 0.0 0.239535 Low Low
cufflinks 0.596063 0.0 2.2822    
cufflinks 0.505454 0.0 1.94945    
cufflinks 0.326        
cufflinks 0.02     Low Low
cufflinks 3.294       High
cufflinks 0.613        
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.19        
cufflinks 0.034     Low Low
cufflinks 1.671       High
cufflinks 0.119        
cufflinks 0.163        
cufflinks 0.22        
cufflinks 0.17        
cufflinks 0.131        
cufflinks 0.091        
cufflinks 0.164        
cufflinks 0.167        

0 Strain