Gene : Glyma.13G176600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33199:SF8 - MACPF DOMAIN-CONTAINING PROTEIN NSL1 Genomic Order:  1766
Name:  ? Glyma.13G176600 Secondary Identifier:  ? PAC:30502200
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G176600 0.5kb upstream 0.5kb upstream 5965 true Chr13: 29066855-29072819 Glycine max
Glyma.13G176600 0.5kb upstream 0.5kb upstream 500 false Chr13: 29072320-29072819 Glycine max
Glyma.13G176600 0.5kb downstream 0.5kb downstream 5965 true Chr13: 29066355-29072319 Glycine max
Glyma.13G176600 0.5kb downstream 0.5kb downstream 500 false Chr13: 29066355-29066854 Glycine max
Glyma.13G176600 1.0kb upstream 1.0kb upstream 6465 true Chr13: 29066855-29073319 Glycine max
Glyma.13G176600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29072320-29073319 Glycine max
Glyma.13G176600 1.0kb downstream 1.0kb downstream 6465 true Chr13: 29065855-29072319 Glycine max
Glyma.13G176600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29065855-29066854 Glycine max
Glyma.13G176600 2.0kb upstream 2.0kb upstream 7465 true Chr13: 29066855-29074319 Glycine max
Glyma.13G176600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29072320-29074319 Glycine max
Glyma.13G176600 2.0kb downstream 2.0kb downstream 7465 true Chr13: 29064855-29072319 Glycine max
Glyma.13G176600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29064855-29066854 Glycine max
Glyma.13G176600 5.0kb upstream 5.0kb upstream 10465 true Chr13: 29066855-29077319 Glycine max
Glyma.13G176600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29072320-29077319 Glycine max
Glyma.13G176600 5.0kb downstream 5.0kb downstream 10465 true Chr13: 29061855-29072319 Glycine max
Glyma.13G176600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29061855-29066854 Glycine max
Glyma.13G176600 10.0kb upstream 10.0kb upstream 15465 true Chr13: 29066855-29082319 Glycine max
Glyma.13G176600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29072320-29082319 Glycine max
Glyma.13G176600 10.0kb downstream 10.0kb downstream 15465 true Chr13: 29056855-29072319 Glycine max
Glyma.13G176600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29056855-29066854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303313 5265 Fabidae View MSA
124061147 5270 Rosid View MSA
123738184 5271 Pentapetalae View MSA
122791371 5272 Eudicot View MSA
122048917 5273 Angiosperm View MSA
121311170 5274 Embryophyte View MSA
123348503 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.06794 0.0 11.5645   High
cufflinks 0.509081 0.0 1.84113    
cufflinks 0.516634 0.0 1.86276    
cufflinks 0.147831 0.0 0.567988 Low Low
cufflinks 1.99808 0.0 6.24737    
cufflinks 5.78638 0.0 15.9015   High
cufflinks 1.1906 0.0 4.00069    
cufflinks 0.724161 0.0 2.55129    
cufflinks 2.08688 0.0 6.48019    
cufflinks 8.164     High  
cufflinks 16.091     High High
cufflinks 1.132        
cufflinks 1.669        
cufflinks 0.491       Low
cufflinks 23.426     High High
cufflinks 1.226        
cufflinks 34.108     High High
cufflinks 0.844        
cufflinks 0.546       Low
cufflinks 0.443       Low
cufflinks 14.568     High High
cufflinks 0.785        
cufflinks 2.08        
cufflinks 9.006     High  
cufflinks 0.748        
cufflinks 18.931     High High

0 Strain