Gene : Glyma.13G176800 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  1768
Name:  ? Glyma.13G176800 Secondary Identifier:  ? PAC:30504138
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G176800 0.5kb upstream 0.5kb upstream 4564 true Chr13: 29091536-29096099 Glycine max
Glyma.13G176800 0.5kb upstream 0.5kb upstream 500 false Chr13: 29091536-29092035 Glycine max
Glyma.13G176800 0.5kb downstream 0.5kb downstream 4564 true Chr13: 29092036-29096599 Glycine max
Glyma.13G176800 0.5kb downstream 0.5kb downstream 500 false Chr13: 29096100-29096599 Glycine max
Glyma.13G176800 1.0kb upstream 1.0kb upstream 5064 true Chr13: 29091036-29096099 Glycine max
Glyma.13G176800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29091036-29092035 Glycine max
Glyma.13G176800 1.0kb downstream 1.0kb downstream 5064 true Chr13: 29092036-29097099 Glycine max
Glyma.13G176800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29096100-29097099 Glycine max
Glyma.13G176800 2.0kb upstream 2.0kb upstream 6064 true Chr13: 29090036-29096099 Glycine max
Glyma.13G176800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29090036-29092035 Glycine max
Glyma.13G176800 2.0kb downstream 2.0kb downstream 6064 true Chr13: 29092036-29098099 Glycine max
Glyma.13G176800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29096100-29098099 Glycine max
Glyma.13G176800 5.0kb upstream 5.0kb upstream 9064 true Chr13: 29087036-29096099 Glycine max
Glyma.13G176800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29087036-29092035 Glycine max
Glyma.13G176800 5.0kb downstream 5.0kb downstream 9064 true Chr13: 29092036-29101099 Glycine max
Glyma.13G176800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29096100-29101099 Glycine max
Glyma.13G176800 10.0kb upstream 10.0kb upstream 14064 true Chr13: 29082036-29096099 Glycine max
Glyma.13G176800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29082036-29092035 Glycine max
Glyma.13G176800 10.0kb downstream 10.0kb downstream 14064 true Chr13: 29092036-29106099 Glycine max
Glyma.13G176800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29096100-29106099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041250 5273 Angiosperm View MSA
122300498 5265 Fabidae View MSA
124066251 5270 Rosid View MSA
123749273 5271 Pentapetalae View MSA
122792066 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121350900 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5508 0.0 50.8    
cufflinks 13.6293 0.0 38.3144    
cufflinks 19.3669 0.0 52.6879    
cufflinks 18.2924 0.0 50.0393    
cufflinks 8.81002 0.0 26.1353   Low
cufflinks 14.1782 0.0 39.6795    
cufflinks 15.8109 0.0 43.8682    
cufflinks 21.6469 0.0 58.6522 High High
cufflinks 11.7863 0.0 33.6857    
cufflinks 7.488       High
cufflinks 6.275     High  
cufflinks 5.187        
cufflinks 2.933       Low
cufflinks 3.14       Low
cufflinks 6.523     High  
cufflinks 4.194        
cufflinks 7.963     High High
cufflinks 5.244        
cufflinks 3.978        
cufflinks 3.768        
cufflinks 5.602        
cufflinks 4.255        
cufflinks 4.088        
cufflinks 7.235     High High
cufflinks 4.208        
cufflinks 7.86     High High

0 Strain