Gene : Glyma.13G177400 G. max Wm82.a2.v1
Defline:  (1 of 46) PF03110 - SBP domain (SBP) Genomic Order:  1774
Name:  ? Glyma.13G177400 Secondary Identifier:  ? PAC:30504005
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G177400 0.5kb upstream 0.5kb upstream 2709 true Chr13: 29139322-29142030 Glycine max
Glyma.13G177400 0.5kb upstream 0.5kb upstream 500 false Chr13: 29141531-29142030 Glycine max
Glyma.13G177400 0.5kb downstream 0.5kb downstream 2709 true Chr13: 29138822-29141530 Glycine max
Glyma.13G177400 0.5kb downstream 0.5kb downstream 500 false Chr13: 29138822-29139321 Glycine max
Glyma.13G177400 1.0kb upstream 1.0kb upstream 3209 true Chr13: 29139322-29142530 Glycine max
Glyma.13G177400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29141531-29142530 Glycine max
Glyma.13G177400 1.0kb downstream 1.0kb downstream 3209 true Chr13: 29138322-29141530 Glycine max
Glyma.13G177400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29138322-29139321 Glycine max
Glyma.13G177400 2.0kb upstream 2.0kb upstream 4209 true Chr13: 29139322-29143530 Glycine max
Glyma.13G177400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29141531-29143530 Glycine max
Glyma.13G177400 2.0kb downstream 2.0kb downstream 4209 true Chr13: 29137322-29141530 Glycine max
Glyma.13G177400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29137322-29139321 Glycine max
Glyma.13G177400 5.0kb upstream 5.0kb upstream 7209 true Chr13: 29139322-29146530 Glycine max
Glyma.13G177400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29141531-29146530 Glycine max
Glyma.13G177400 5.0kb downstream 5.0kb downstream 7209 true Chr13: 29134322-29141530 Glycine max
Glyma.13G177400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29134322-29139321 Glycine max
Glyma.13G177400 10.0kb upstream 10.0kb upstream 12209 true Chr13: 29139322-29151530 Glycine max
Glyma.13G177400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29141531-29151530 Glycine max
Glyma.13G177400 10.0kb downstream 10.0kb downstream 12209 true Chr13: 29129322-29141530 Glycine max
Glyma.13G177400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29129322-29139321 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312027 5265 Fabidae View MSA
124068768 5270 Rosid View MSA
123745338 5271 Pentapetalae View MSA
122797834 5272 Eudicot View MSA
122050798 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351345 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.63917 0.0 12.321   High
cufflinks 1.43324 0.0 5.23419    
cufflinks 1.62437 0.0 5.86867    
cufflinks 6.89654 0.0 21.3461   High
cufflinks 0.289887 0.0 1.13852   Low
cufflinks 0.965848 0.0 3.60398    
cufflinks 0.248053 0.0 0.979514   Low
cufflinks 0.935767 0.0 3.49073    
cufflinks 1.31745 0.0 4.83134    
cufflinks 1.84        
cufflinks 0.154       Low
cufflinks 1.069        
cufflinks 0.615        
cufflinks 0.188        
cufflinks 0.118       Low
cufflinks 1.174        
cufflinks 0.466        
cufflinks 1.369        
cufflinks 0.607        
cufflinks 1.444        
cufflinks 0.204        
cufflinks 2.144       High
cufflinks 5.451       High
cufflinks 0.086       Low
cufflinks 1.186        
cufflinks 0.119       Low

0 Strain