Gene : Glyma.13G177600 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  1776
Name:  ? Glyma.13G177600 Secondary Identifier:  ? PAC:30502727
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G177600 0.5kb upstream 0.5kb upstream 1597 true Chr13: 29166705-29168301 Glycine max
Glyma.13G177600 0.5kb upstream 0.5kb upstream 500 false Chr13: 29167802-29168301 Glycine max
Glyma.13G177600 0.5kb downstream 0.5kb downstream 1597 true Chr13: 29166205-29167801 Glycine max
Glyma.13G177600 0.5kb downstream 0.5kb downstream 500 false Chr13: 29166205-29166704 Glycine max
Glyma.13G177600 1.0kb upstream 1.0kb upstream 2097 true Chr13: 29166705-29168801 Glycine max
Glyma.13G177600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29167802-29168801 Glycine max
Glyma.13G177600 1.0kb downstream 1.0kb downstream 2097 true Chr13: 29165705-29167801 Glycine max
Glyma.13G177600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29165705-29166704 Glycine max
Glyma.13G177600 2.0kb upstream 2.0kb upstream 3097 true Chr13: 29166705-29169801 Glycine max
Glyma.13G177600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29167802-29169801 Glycine max
Glyma.13G177600 2.0kb downstream 2.0kb downstream 3097 true Chr13: 29164705-29167801 Glycine max
Glyma.13G177600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29164705-29166704 Glycine max
Glyma.13G177600 5.0kb upstream 5.0kb upstream 6097 true Chr13: 29166705-29172801 Glycine max
Glyma.13G177600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29167802-29172801 Glycine max
Glyma.13G177600 5.0kb downstream 5.0kb downstream 6097 true Chr13: 29161705-29167801 Glycine max
Glyma.13G177600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29161705-29166704 Glycine max
Glyma.13G177600 10.0kb upstream 10.0kb upstream 11097 true Chr13: 29166705-29177801 Glycine max
Glyma.13G177600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29167802-29177801 Glycine max
Glyma.13G177600 10.0kb downstream 10.0kb downstream 11097 true Chr13: 29156705-29167801 Glycine max
Glyma.13G177600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29156705-29166704 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254217 5265 Fabidae View MSA
124070981 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.119979 0.0 0.483839 Low  
cufflinks 0.347861 0.0 1.34716    
cufflinks 0.122588 0.0 0.494078 Low  
cufflinks 0.165333 0.0 0.65785 Low  
cufflinks 0.745523 0.0 2.79054    
cufflinks 0.0453057 0.0 0.194159 Low  
cufflinks 0.0204779 0.0 0.0937932 Low Low
cufflinks 4.94599 0.0 15.6747   High
cufflinks 2.00057 0.0 7.05752   High
cufflinks 0.125        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.147        
cufflinks 0.548       High
cufflinks 0.144        
cufflinks 0.1        
cufflinks 0.017     Low Low
cufflinks 0.06     Low  
cufflinks 0.239       High
cufflinks 0.063     Low  
cufflinks 0.016     Low Low
cufflinks 0.112        
cufflinks 0.028     Low  
cufflinks 0.113        
cufflinks 0.018     Low Low
cufflinks 0.031     Low  
cufflinks 0.037     Low  

0 Strain