Gene : Glyma.13G177900 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR13718 - RIBOSOMAL S SUBUNIT Genomic Order:  1779
Name:  ? Glyma.13G177900 Secondary Identifier:  ? PAC:30503334
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G177900 0.5kb upstream 0.5kb upstream 3061 true Chr13: 29181986-29185046 Glycine max
Glyma.13G177900 0.5kb upstream 0.5kb upstream 500 false Chr13: 29181986-29182485 Glycine max
Glyma.13G177900 0.5kb downstream 0.5kb downstream 3061 true Chr13: 29182486-29185546 Glycine max
Glyma.13G177900 0.5kb downstream 0.5kb downstream 500 false Chr13: 29185047-29185546 Glycine max
Glyma.13G177900 1.0kb upstream 1.0kb upstream 3561 true Chr13: 29181486-29185046 Glycine max
Glyma.13G177900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29181486-29182485 Glycine max
Glyma.13G177900 1.0kb downstream 1.0kb downstream 3561 true Chr13: 29182486-29186046 Glycine max
Glyma.13G177900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29185047-29186046 Glycine max
Glyma.13G177900 2.0kb upstream 2.0kb upstream 4561 true Chr13: 29180486-29185046 Glycine max
Glyma.13G177900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29180486-29182485 Glycine max
Glyma.13G177900 2.0kb downstream 2.0kb downstream 4561 true Chr13: 29182486-29187046 Glycine max
Glyma.13G177900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29185047-29187046 Glycine max
Glyma.13G177900 5.0kb upstream 5.0kb upstream 7561 true Chr13: 29177486-29185046 Glycine max
Glyma.13G177900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29177486-29182485 Glycine max
Glyma.13G177900 5.0kb downstream 5.0kb downstream 7561 true Chr13: 29182486-29190046 Glycine max
Glyma.13G177900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29185047-29190046 Glycine max
Glyma.13G177900 10.0kb upstream 10.0kb upstream 12561 true Chr13: 29172486-29185046 Glycine max
Glyma.13G177900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29172486-29182485 Glycine max
Glyma.13G177900 10.0kb downstream 10.0kb downstream 12561 true Chr13: 29182486-29195046 Glycine max
Glyma.13G177900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29185047-29195046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300537 5265 Fabidae View MSA
124064887 5270 Rosid View MSA
123746932 5271 Pentapetalae View MSA
122792808 5272 Eudicot View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.8098 0.0 195.973 High High
cufflinks 54.3915 0.0 150.417 High High
cufflinks 16.1142 0.0 43.3902    
cufflinks 23.8881 0.0 63.7304 High  
cufflinks 16.7488 0.0 44.8814    
cufflinks 8.17637 0.0 23.0676   Low
cufflinks 22.4072 0.0 59.7795 High  
cufflinks 21.2175 0.0 56.6368 High  
cufflinks 8.91597 0.0 24.9067   Low
cufflinks 17.362     High  
cufflinks 2.884        
cufflinks 10.278     High  
cufflinks 2.561        
cufflinks 2.85        
cufflinks 5.316     High  
cufflinks 103.011     High High
cufflinks 1.6       Low
cufflinks 9.127     High  
cufflinks 27.635     High  
cufflinks 98.19     High High
cufflinks 3.737        
cufflinks 87.74     High High
cufflinks 79.454     High High
cufflinks 3.009        
cufflinks 95.704     High High
cufflinks 1.599       Low

0 Strain