Gene : Glyma.13G164000 G. max Wm82.a2.v1
Genomic Order:  1640 Name:  ? Glyma.13G164000
Secondary Identifier:  ? PAC:30506138
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G164000 0.5kb upstream 0.5kb upstream 1870 true Chr13: 27911103-27912972 Glycine max
Glyma.13G164000 0.5kb upstream 0.5kb upstream 500 false Chr13: 27911103-27911602 Glycine max
Glyma.13G164000 0.5kb downstream 0.5kb downstream 1870 true Chr13: 27911603-27913472 Glycine max
Glyma.13G164000 0.5kb downstream 0.5kb downstream 500 false Chr13: 27912973-27913472 Glycine max
Glyma.13G164000 1.0kb upstream 1.0kb upstream 2370 true Chr13: 27910603-27912972 Glycine max
Glyma.13G164000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27910603-27911602 Glycine max
Glyma.13G164000 1.0kb downstream 1.0kb downstream 2370 true Chr13: 27911603-27913972 Glycine max
Glyma.13G164000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27912973-27913972 Glycine max
Glyma.13G164000 2.0kb upstream 2.0kb upstream 3370 true Chr13: 27909603-27912972 Glycine max
Glyma.13G164000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27909603-27911602 Glycine max
Glyma.13G164000 2.0kb downstream 2.0kb downstream 3370 true Chr13: 27911603-27914972 Glycine max
Glyma.13G164000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27912973-27914972 Glycine max
Glyma.13G164000 5.0kb upstream 5.0kb upstream 6370 true Chr13: 27906603-27912972 Glycine max
Glyma.13G164000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27906603-27911602 Glycine max
Glyma.13G164000 5.0kb downstream 5.0kb downstream 6370 true Chr13: 27911603-27917972 Glycine max
Glyma.13G164000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27912973-27917972 Glycine max
Glyma.13G164000 10.0kb upstream 10.0kb upstream 11370 true Chr13: 27901603-27912972 Glycine max
Glyma.13G164000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27901603-27911602 Glycine max
Glyma.13G164000 10.0kb downstream 10.0kb downstream 11370 true Chr13: 27911603-27922972 Glycine max
Glyma.13G164000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27912973-27922972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027774 5273 Angiosperm View MSA
122311982 5265 Fabidae View MSA
124063450 5270 Rosid View MSA
123745602 5271 Pentapetalae View MSA
122771566 5272 Eudicot View MSA
121297384 5274 Embryophyte View MSA
123335447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.02522 0.0 15.1732    
cufflinks 4.54322 0.0 13.911    
cufflinks 4.81865 0.0 14.5954    
cufflinks 6.79595 0.0 19.6605   High
cufflinks 2.69311 0.0 8.8734    
cufflinks 3.04565 0.0 9.85981    
cufflinks 2.48258 0.0 8.25955   Low
cufflinks 1.99596 0.0 6.79457   Low
cufflinks 4.30386 0.0 13.2657    
cufflinks 1.538        
cufflinks 0.239       Low
cufflinks 5.018        
cufflinks 1.212        
cufflinks 0.089       Low
cufflinks 0.44       Low
cufflinks 11.899     High High
cufflinks 1.582        
cufflinks 3.938        
cufflinks 4.622        
cufflinks 18.181     High High
cufflinks 1.231        
cufflinks 14.596     High High
cufflinks 13.166     High High
cufflinks 0.783        
cufflinks 14.561     High High
cufflinks 0.915        

0 Strain