Gene : Glyma.13G166400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18804:SF7 - RIBOSOMAL PROTEIN Genomic Order:  1664
Name:  ? Glyma.13G166400 Secondary Identifier:  ? PAC:30501705
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G166400 0.5kb upstream 0.5kb upstream 2810 true Chr13: 28116880-28119689 Glycine max
Glyma.13G166400 0.5kb upstream 0.5kb upstream 500 false Chr13: 28119190-28119689 Glycine max
Glyma.13G166400 0.5kb downstream 0.5kb downstream 2810 true Chr13: 28116380-28119189 Glycine max
Glyma.13G166400 0.5kb downstream 0.5kb downstream 500 false Chr13: 28116380-28116879 Glycine max
Glyma.13G166400 1.0kb upstream 1.0kb upstream 3310 true Chr13: 28116880-28120189 Glycine max
Glyma.13G166400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28119190-28120189 Glycine max
Glyma.13G166400 1.0kb downstream 1.0kb downstream 3310 true Chr13: 28115880-28119189 Glycine max
Glyma.13G166400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28115880-28116879 Glycine max
Glyma.13G166400 2.0kb upstream 2.0kb upstream 4310 true Chr13: 28116880-28121189 Glycine max
Glyma.13G166400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28119190-28121189 Glycine max
Glyma.13G166400 2.0kb downstream 2.0kb downstream 4310 true Chr13: 28114880-28119189 Glycine max
Glyma.13G166400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28114880-28116879 Glycine max
Glyma.13G166400 5.0kb upstream 5.0kb upstream 7310 true Chr13: 28116880-28124189 Glycine max
Glyma.13G166400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28119190-28124189 Glycine max
Glyma.13G166400 5.0kb downstream 5.0kb downstream 7310 true Chr13: 28111880-28119189 Glycine max
Glyma.13G166400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28111880-28116879 Glycine max
Glyma.13G166400 10.0kb upstream 10.0kb upstream 12310 true Chr13: 28116880-28129189 Glycine max
Glyma.13G166400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28119190-28129189 Glycine max
Glyma.13G166400 10.0kb downstream 10.0kb downstream 12310 true Chr13: 28106880-28119189 Glycine max
Glyma.13G166400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28106880-28116879 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299483 5265 Fabidae View MSA
124061900 5270 Rosid View MSA
123740045 5271 Pentapetalae View MSA
122796422 5272 Eudicot View MSA
122050877 5273 Angiosperm View MSA
121347060 5274 Embryophyte View MSA
123428353 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.7904 0.0 82.1482 High  
cufflinks 15.7198 0.0 42.9366    
cufflinks 17.5011 0.0 47.4355    
cufflinks 16.7449 0.0 45.5302    
cufflinks 27.9278 0.0 74.5605 High  
cufflinks 42.6474 0.0 114.388 High High
cufflinks 12.1676 0.0 33.9942   Low
cufflinks 19.2591 0.0 51.9614    
cufflinks 29.1814 0.0 77.865 High  
cufflinks 7.16        
cufflinks 15.302     High  
cufflinks 6.674        
cufflinks 9.026     High  
cufflinks 9.904     High  
cufflinks 26.497     High High
cufflinks 7.653     High  
cufflinks 3.939       Low
cufflinks 4.916       Low
cufflinks 7.536     High  
cufflinks 10.322     High  
cufflinks 20.134     High High
cufflinks 9.293     High  
cufflinks 5.719       Low
cufflinks 16.453     High High
cufflinks 9.544     High  
cufflinks 12.036     High  

0 Strain