Gene : Glyma.13G168600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11774:SF6 - PROTEIN FARNESYLTRANSFERASE SUBUNIT BETA Genomic Order:  1686
Name:  ? Glyma.13G168600 Secondary Identifier:  ? PAC:30506034
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G168600 0.5kb upstream 0.5kb upstream 6428 true Chr13: 28298272-28304699 Glycine max
Glyma.13G168600 0.5kb upstream 0.5kb upstream 500 false Chr13: 28304200-28304699 Glycine max
Glyma.13G168600 0.5kb downstream 0.5kb downstream 6428 true Chr13: 28297772-28304199 Glycine max
Glyma.13G168600 0.5kb downstream 0.5kb downstream 500 false Chr13: 28297772-28298271 Glycine max
Glyma.13G168600 1.0kb upstream 1.0kb upstream 6928 true Chr13: 28298272-28305199 Glycine max
Glyma.13G168600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28304200-28305199 Glycine max
Glyma.13G168600 1.0kb downstream 1.0kb downstream 6928 true Chr13: 28297272-28304199 Glycine max
Glyma.13G168600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28297272-28298271 Glycine max
Glyma.13G168600 2.0kb upstream 2.0kb upstream 7928 true Chr13: 28298272-28306199 Glycine max
Glyma.13G168600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28304200-28306199 Glycine max
Glyma.13G168600 2.0kb downstream 2.0kb downstream 7928 true Chr13: 28296272-28304199 Glycine max
Glyma.13G168600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28296272-28298271 Glycine max
Glyma.13G168600 5.0kb upstream 5.0kb upstream 10928 true Chr13: 28298272-28309199 Glycine max
Glyma.13G168600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28304200-28309199 Glycine max
Glyma.13G168600 5.0kb downstream 5.0kb downstream 10928 true Chr13: 28293272-28304199 Glycine max
Glyma.13G168600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28293272-28298271 Glycine max
Glyma.13G168600 10.0kb upstream 10.0kb upstream 15928 true Chr13: 28298272-28314199 Glycine max
Glyma.13G168600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28304200-28314199 Glycine max
Glyma.13G168600 10.0kb downstream 10.0kb downstream 15928 true Chr13: 28288272-28304199 Glycine max
Glyma.13G168600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28288272-28298271 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307603 5265 Fabidae View MSA
124069315 5270 Rosid View MSA
123746024 5271 Pentapetalae View MSA
122794405 5272 Eudicot View MSA
122048431 5273 Angiosperm View MSA
123428886 5275 Viridiplantae View MSA
121348360 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.36507 0.0 18.0284   Low
cufflinks 8.0789 0.0 22.3876    
cufflinks 8.66973 0.0 23.8254    
cufflinks 9.91724 0.0 27.0381    
cufflinks 8.2277 0.0 22.7278    
cufflinks 7.34597 0.0 20.5076    
cufflinks 10.3336 0.0 28.1055    
cufflinks 8.95244 0.0 24.584    
cufflinks 15.5363 0.0 41.5332   High
cufflinks 1.768        
cufflinks 0.871       Low
cufflinks 2.032       High
cufflinks 1.828        
cufflinks 2.355       High
cufflinks 1.615        
cufflinks 1.293        
cufflinks 0.834       Low
cufflinks 1.919        
cufflinks 1.901        
cufflinks 1.465        
cufflinks 0.94       Low
cufflinks 1.312        
cufflinks 1.363        
cufflinks 0.754       Low
cufflinks 1.231        
cufflinks 1.023        

0 Strain