Gene : Glyma.13G156600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12136//PTHR12136:SF49 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  1566
Name:  ? Glyma.13G156600 Secondary Identifier:  ? PAC:30501585
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G156600 0.5kb upstream 0.5kb upstream 18642 true Chr13: 27173454-27192095 Glycine max
Glyma.13G156600 0.5kb upstream 0.5kb upstream 500 false Chr13: 27191596-27192095 Glycine max
Glyma.13G156600 0.5kb downstream 0.5kb downstream 18642 true Chr13: 27172954-27191595 Glycine max
Glyma.13G156600 0.5kb downstream 0.5kb downstream 500 false Chr13: 27172954-27173453 Glycine max
Glyma.13G156600 1.0kb upstream 1.0kb upstream 19142 true Chr13: 27173454-27192595 Glycine max
Glyma.13G156600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27191596-27192595 Glycine max
Glyma.13G156600 1.0kb downstream 1.0kb downstream 19142 true Chr13: 27172454-27191595 Glycine max
Glyma.13G156600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27172454-27173453 Glycine max
Glyma.13G156600 2.0kb upstream 2.0kb upstream 20142 true Chr13: 27173454-27193595 Glycine max
Glyma.13G156600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27191596-27193595 Glycine max
Glyma.13G156600 2.0kb downstream 2.0kb downstream 20142 true Chr13: 27171454-27191595 Glycine max
Glyma.13G156600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27171454-27173453 Glycine max
Glyma.13G156600 5.0kb upstream 5.0kb upstream 23142 true Chr13: 27173454-27196595 Glycine max
Glyma.13G156600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27191596-27196595 Glycine max
Glyma.13G156600 5.0kb downstream 5.0kb downstream 23142 true Chr13: 27168454-27191595 Glycine max
Glyma.13G156600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27168454-27173453 Glycine max
Glyma.13G156600 10.0kb upstream 10.0kb upstream 28142 true Chr13: 27173454-27201595 Glycine max
Glyma.13G156600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27191596-27201595 Glycine max
Glyma.13G156600 10.0kb downstream 10.0kb downstream 28142 true Chr13: 27163454-27191595 Glycine max
Glyma.13G156600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27163454-27173453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309252 5265 Fabidae View MSA
124075658 5270 Rosid View MSA
123742206 5271 Pentapetalae View MSA
122790410 5272 Eudicot View MSA
122042175 5273 Angiosperm View MSA
121350170 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.39799 0.0 14.7956   Low
cufflinks 7.34818 0.0 25.0499   High
cufflinks 6.75429 0.0 26.0465    
cufflinks 4.85098 0.0 19.5608    
cufflinks 6.28831 0.0 24.7964    
cufflinks 3.74571 0.0 14.526   Low
cufflinks 5.34909 0.0 21.57    
cufflinks 6.24426 0.0 24.3425    
cufflinks 4.80227 0.0 17.2098    
cufflinks 0.424        
cufflinks 0.165       Low
cufflinks 0.655       High
cufflinks 0.422        
cufflinks 0.453        
cufflinks 0.159       Low
cufflinks 0.455        
cufflinks 0.282        
cufflinks 0.695       High
cufflinks 0.721       High
cufflinks 0.628        
cufflinks 0.167       Low
cufflinks 0.619        
cufflinks 0.407        
cufflinks 0.169       Low
cufflinks 0.548        
cufflinks 0.343        

0 Strain