Gene : Glyma.13G158800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Genomic Order:  1588
Name:  ? Glyma.13G158800 Secondary Identifier:  ? PAC:30503756
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G158800 0.5kb upstream 0.5kb upstream 8828 true Chr13: 27394216-27403043 Glycine max
Glyma.13G158800 0.5kb upstream 0.5kb upstream 500 false Chr13: 27402544-27403043 Glycine max
Glyma.13G158800 0.5kb downstream 0.5kb downstream 8828 true Chr13: 27393716-27402543 Glycine max
Glyma.13G158800 0.5kb downstream 0.5kb downstream 500 false Chr13: 27393716-27394215 Glycine max
Glyma.13G158800 1.0kb upstream 1.0kb upstream 9328 true Chr13: 27394216-27403543 Glycine max
Glyma.13G158800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27402544-27403543 Glycine max
Glyma.13G158800 1.0kb downstream 1.0kb downstream 9328 true Chr13: 27393216-27402543 Glycine max
Glyma.13G158800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27393216-27394215 Glycine max
Glyma.13G158800 2.0kb upstream 2.0kb upstream 10328 true Chr13: 27394216-27404543 Glycine max
Glyma.13G158800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27402544-27404543 Glycine max
Glyma.13G158800 2.0kb downstream 2.0kb downstream 10328 true Chr13: 27392216-27402543 Glycine max
Glyma.13G158800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27392216-27394215 Glycine max
Glyma.13G158800 5.0kb upstream 5.0kb upstream 13328 true Chr13: 27394216-27407543 Glycine max
Glyma.13G158800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27402544-27407543 Glycine max
Glyma.13G158800 5.0kb downstream 5.0kb downstream 13328 true Chr13: 27389216-27402543 Glycine max
Glyma.13G158800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27389216-27394215 Glycine max
Glyma.13G158800 10.0kb upstream 10.0kb upstream 18328 true Chr13: 27394216-27412543 Glycine max
Glyma.13G158800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27402544-27412543 Glycine max
Glyma.13G158800 10.0kb downstream 10.0kb downstream 18328 true Chr13: 27384216-27402543 Glycine max
Glyma.13G158800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27384216-27394215 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304811 5265 Fabidae View MSA
124070265 5270 Rosid View MSA
123752786 5271 Pentapetalae View MSA
122794247 5272 Eudicot View MSA
122049559 5273 Angiosperm View MSA
121350875 5274 Embryophyte View MSA
123381918 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.64163 0.0 25.688   Low
cufflinks 16.192 0.0 59.3794    
cufflinks 10.9469 0.0 38.1144    
cufflinks 9.78335 0.0 33.6648    
cufflinks 15.7661 0.0 57.501    
cufflinks 8.88604 0.0 30.448    
cufflinks 17.6673 0.0 65.8068   High
cufflinks 8.33121 0.0 28.4746   Low
cufflinks 17.5923 0.0 65.6542   High
cufflinks 3.173       Low
cufflinks 6.971     High  
cufflinks 3.885        
cufflinks 4.504        
cufflinks 4.598        
cufflinks 10.16     High High
cufflinks 4.952        
cufflinks 2.837       Low
cufflinks 6.639        
cufflinks 6.883        
cufflinks 4.571        
cufflinks 6.805     High  
cufflinks 4.65        
cufflinks 4.067        
cufflinks 7.747     High High
cufflinks 4.428        
cufflinks 5.699        

0 Strain