Gene : Glyma.13G159500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31245:SF1 - UBIQUITIN SYSTEM COMPONENT CUE PROTEIN Genomic Order:  1595
Name:  ? Glyma.13G159500 Secondary Identifier:  ? PAC:30503743
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G159500 0.5kb upstream 0.5kb upstream 2752 true Chr13: 27476280-27479031 Glycine max
Glyma.13G159500 0.5kb upstream 0.5kb upstream 500 false Chr13: 27476280-27476779 Glycine max
Glyma.13G159500 0.5kb downstream 0.5kb downstream 2752 true Chr13: 27476780-27479531 Glycine max
Glyma.13G159500 0.5kb downstream 0.5kb downstream 500 false Chr13: 27479032-27479531 Glycine max
Glyma.13G159500 1.0kb upstream 1.0kb upstream 3252 true Chr13: 27475780-27479031 Glycine max
Glyma.13G159500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27475780-27476779 Glycine max
Glyma.13G159500 1.0kb downstream 1.0kb downstream 3252 true Chr13: 27476780-27480031 Glycine max
Glyma.13G159500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27479032-27480031 Glycine max
Glyma.13G159500 2.0kb upstream 2.0kb upstream 4252 true Chr13: 27474780-27479031 Glycine max
Glyma.13G159500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27474780-27476779 Glycine max
Glyma.13G159500 2.0kb downstream 2.0kb downstream 4252 true Chr13: 27476780-27481031 Glycine max
Glyma.13G159500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27479032-27481031 Glycine max
Glyma.13G159500 5.0kb upstream 5.0kb upstream 7252 true Chr13: 27471780-27479031 Glycine max
Glyma.13G159500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27471780-27476779 Glycine max
Glyma.13G159500 5.0kb downstream 5.0kb downstream 7252 true Chr13: 27476780-27484031 Glycine max
Glyma.13G159500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27479032-27484031 Glycine max
Glyma.13G159500 10.0kb upstream 10.0kb upstream 12252 true Chr13: 27466780-27479031 Glycine max
Glyma.13G159500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27466780-27476779 Glycine max
Glyma.13G159500 10.0kb downstream 10.0kb downstream 12252 true Chr13: 27476780-27489031 Glycine max
Glyma.13G159500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27479032-27489031 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303600 5265 Fabidae View MSA
124074817 5270 Rosid View MSA
123743103 5271 Pentapetalae View MSA
122794733 5272 Eudicot View MSA
122042927 5273 Angiosperm View MSA
121343800 5274 Embryophyte View MSA
123427997 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.105 0.0 27.8201    
cufflinks 13.0821 0.0 35.3945    
cufflinks 5.76311 0.0 16.8268   Low
cufflinks 23.6611 0.0 63.1425 High High
cufflinks 17.7333 0.0 47.4178    
cufflinks 10.0998 0.0 27.7967    
cufflinks 10.3121 0.0 28.3805    
cufflinks 30.8232 0.0 82.7361 High High
cufflinks 15.472 0.0 41.5406    
cufflinks 32.037     High High
cufflinks 3.636        
cufflinks 6.988        
cufflinks 10.8     High  
cufflinks 10.244     High  
cufflinks 7.298     High  
cufflinks 4.974        
cufflinks 37.927     High High
cufflinks 8.796     High  
cufflinks 8.38     High  
cufflinks 3.168       Low
cufflinks 4.72        
cufflinks 3.778        
cufflinks 5.677        
cufflinks 2.876       Low
cufflinks 3.378        
cufflinks 9.949     High  

0 Strain