Gene : Glyma.13G159600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10891//PTHR10891:SF546 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1596
Name:  ? Glyma.13G159600 Secondary Identifier:  ? PAC:30500054
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G159600 0.5kb upstream 0.5kb upstream 1876 true Chr13: 27482929-27484804 Glycine max
Glyma.13G159600 0.5kb upstream 0.5kb upstream 500 false Chr13: 27484305-27484804 Glycine max
Glyma.13G159600 0.5kb downstream 0.5kb downstream 1876 true Chr13: 27482429-27484304 Glycine max
Glyma.13G159600 0.5kb downstream 0.5kb downstream 500 false Chr13: 27482429-27482928 Glycine max
Glyma.13G159600 1.0kb upstream 1.0kb upstream 2376 true Chr13: 27482929-27485304 Glycine max
Glyma.13G159600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27484305-27485304 Glycine max
Glyma.13G159600 1.0kb downstream 1.0kb downstream 2376 true Chr13: 27481929-27484304 Glycine max
Glyma.13G159600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27481929-27482928 Glycine max
Glyma.13G159600 2.0kb upstream 2.0kb upstream 3376 true Chr13: 27482929-27486304 Glycine max
Glyma.13G159600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27484305-27486304 Glycine max
Glyma.13G159600 2.0kb downstream 2.0kb downstream 3376 true Chr13: 27480929-27484304 Glycine max
Glyma.13G159600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27480929-27482928 Glycine max
Glyma.13G159600 5.0kb upstream 5.0kb upstream 6376 true Chr13: 27482929-27489304 Glycine max
Glyma.13G159600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27484305-27489304 Glycine max
Glyma.13G159600 5.0kb downstream 5.0kb downstream 6376 true Chr13: 27477929-27484304 Glycine max
Glyma.13G159600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27477929-27482928 Glycine max
Glyma.13G159600 10.0kb upstream 10.0kb upstream 11376 true Chr13: 27482929-27494304 Glycine max
Glyma.13G159600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27484305-27494304 Glycine max
Glyma.13G159600 10.0kb downstream 10.0kb downstream 11376 true Chr13: 27472929-27484304 Glycine max
Glyma.13G159600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27472929-27482928 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028011 5273 Angiosperm View MSA
122302288 5265 Fabidae View MSA
124071091 5270 Rosid View MSA
123752599 5271 Pentapetalae View MSA
122791242 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4026 0.0 31.409   High
cufflinks 3.36308 0.0 10.7708    
cufflinks 9.6921 0.0 26.9944   High
cufflinks 3.16132 0.0 10.2068    
cufflinks 1.80114 0.0 6.24698    
cufflinks 0.615167 0.0 2.28946   Low
cufflinks 0.227239 0.0 0.883846   Low
cufflinks 9.52279 0.0 26.5973    
cufflinks 1.62801 0.0 5.68506    
cufflinks 13.16     High  
cufflinks 0.97        
cufflinks 6.075        
cufflinks 1.298        
cufflinks 0.645        
cufflinks 0.058       Low
cufflinks 13.158     High  
cufflinks 5.548        
cufflinks 6.604        
cufflinks 2.775        
cufflinks 18.582     High High
cufflinks 0.975        
cufflinks 17.587     High High
cufflinks 9.795     High  
cufflinks 0.507       Low
cufflinks 15.556     High High
cufflinks 1.598        

0 Strain