Gene : Glyma.13G161600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12526//PTHR12526:SF334 - GLYCOSYLTRANSFERASE Genomic Order:  1616
Name:  ? Glyma.13G161600 Secondary Identifier:  ? PAC:30500532
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7238 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G161600 0.5kb upstream 0.5kb upstream 7004 true Chr13: 27715861-27722864 Glycine max
Glyma.13G161600 0.5kb upstream 0.5kb upstream 500 false Chr13: 27722365-27722864 Glycine max
Glyma.13G161600 0.5kb downstream 0.5kb downstream 7004 true Chr13: 27715361-27722364 Glycine max
Glyma.13G161600 0.5kb downstream 0.5kb downstream 500 false Chr13: 27715361-27715860 Glycine max
Glyma.13G161600 1.0kb upstream 1.0kb upstream 7504 true Chr13: 27715861-27723364 Glycine max
Glyma.13G161600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27722365-27723364 Glycine max
Glyma.13G161600 1.0kb downstream 1.0kb downstream 7504 true Chr13: 27714861-27722364 Glycine max
Glyma.13G161600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27714861-27715860 Glycine max
Glyma.13G161600 2.0kb upstream 2.0kb upstream 8504 true Chr13: 27715861-27724364 Glycine max
Glyma.13G161600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27722365-27724364 Glycine max
Glyma.13G161600 2.0kb downstream 2.0kb downstream 8504 true Chr13: 27713861-27722364 Glycine max
Glyma.13G161600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27713861-27715860 Glycine max
Glyma.13G161600 5.0kb upstream 5.0kb upstream 11504 true Chr13: 27715861-27727364 Glycine max
Glyma.13G161600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27722365-27727364 Glycine max
Glyma.13G161600 5.0kb downstream 5.0kb downstream 11504 true Chr13: 27710861-27722364 Glycine max
Glyma.13G161600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27710861-27715860 Glycine max
Glyma.13G161600 10.0kb upstream 10.0kb upstream 16504 true Chr13: 27715861-27732364 Glycine max
Glyma.13G161600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27722365-27732364 Glycine max
Glyma.13G161600 10.0kb downstream 10.0kb downstream 16504 true Chr13: 27705861-27722364 Glycine max
Glyma.13G161600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27705861-27715860 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306114 5265 Fabidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5435 0.0 70.2313    
cufflinks 15.4097 0.0 56.2181    
cufflinks 76.9153 0.0 442.668 High High
cufflinks 24.5844 0.0 100.502 High  
cufflinks 21.349 0.0 72.3086 High  
cufflinks 15.2564 0.0 48.2787    
cufflinks 16.5256 0.0 61.2239    
cufflinks 31.3941 0.0 119.068 High  
cufflinks 24.5667 0.0 100.33 High  
cufflinks 6.024        
cufflinks 2.234       Low
cufflinks 18.178     High High
cufflinks 7.45     High  
cufflinks 5.701        
cufflinks 5.316     High  
cufflinks 5.619        
cufflinks 5.167        
cufflinks 10.579     High High
cufflinks 7.191        
cufflinks 6.14        
cufflinks 3.149       Low
cufflinks 6.82        
cufflinks 5.339        
cufflinks 2.908       Low
cufflinks 5.385        
cufflinks 4.29        

0 Strain