Gene : Glyma.13G162200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10903:SF68 - TRANSLOCASE OF CHLOROPLAST 90, CHLOROPLASTIC Genomic Order:  1622
Name:  ? Glyma.13G162200 Secondary Identifier:  ? PAC:30500982
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G162200 0.5kb upstream 0.5kb upstream 5016 true Chr13: 27768047-27773062 Glycine max
Glyma.13G162200 0.5kb upstream 0.5kb upstream 500 false Chr13: 27772563-27773062 Glycine max
Glyma.13G162200 0.5kb downstream 0.5kb downstream 5016 true Chr13: 27767547-27772562 Glycine max
Glyma.13G162200 0.5kb downstream 0.5kb downstream 500 false Chr13: 27767547-27768046 Glycine max
Glyma.13G162200 1.0kb upstream 1.0kb upstream 5516 true Chr13: 27768047-27773562 Glycine max
Glyma.13G162200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27772563-27773562 Glycine max
Glyma.13G162200 1.0kb downstream 1.0kb downstream 5516 true Chr13: 27767047-27772562 Glycine max
Glyma.13G162200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27767047-27768046 Glycine max
Glyma.13G162200 2.0kb upstream 2.0kb upstream 6516 true Chr13: 27768047-27774562 Glycine max
Glyma.13G162200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27772563-27774562 Glycine max
Glyma.13G162200 2.0kb downstream 2.0kb downstream 6516 true Chr13: 27766047-27772562 Glycine max
Glyma.13G162200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27766047-27768046 Glycine max
Glyma.13G162200 5.0kb upstream 5.0kb upstream 9516 true Chr13: 27768047-27777562 Glycine max
Glyma.13G162200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27772563-27777562 Glycine max
Glyma.13G162200 5.0kb downstream 5.0kb downstream 9516 true Chr13: 27763047-27772562 Glycine max
Glyma.13G162200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27763047-27768046 Glycine max
Glyma.13G162200 10.0kb upstream 10.0kb upstream 14516 true Chr13: 27768047-27782562 Glycine max
Glyma.13G162200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27772563-27782562 Glycine max
Glyma.13G162200 10.0kb downstream 10.0kb downstream 14516 true Chr13: 27758047-27772562 Glycine max
Glyma.13G162200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27758047-27768046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314878 5265 Fabidae View MSA
124069161 5270 Rosid View MSA
123748605 5271 Pentapetalae View MSA
122793067 5272 Eudicot View MSA
122047543 5273 Angiosperm View MSA
121310755 5274 Embryophyte View MSA
123425638 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.39444 0.0 12.3106   High
cufflinks 2.39095 0.0 7.21147    
cufflinks 3.93317 0.0 11.1023    
cufflinks 2.76156 0.0 8.16083    
cufflinks 2.40466 0.0 7.27022    
cufflinks 3.09938 0.0 9.02607    
cufflinks 4.52794 0.0 12.6837   High
cufflinks 1.94793 0.0 6.04974   Low
cufflinks 2.64367 0.0 7.86446    
cufflinks 2.316        
cufflinks 2.56        
cufflinks 3.935       High
cufflinks 1.965       Low
cufflinks 1.828       Low
cufflinks 2.392        
cufflinks 1.981       Low
cufflinks 2.226        
cufflinks 3.334       High
cufflinks 2.576        
cufflinks 2.4        
cufflinks 2.311        
cufflinks 2.345        
cufflinks 2.929        
cufflinks 2.599        
cufflinks 2.196        
cufflinks 2.2        

0 Strain