Gene : Glyma.13G148400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC Genomic Order:  1484
Name:  ? Glyma.13G148400 Secondary Identifier:  ? PAC:30506101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G148400 0.5kb upstream 0.5kb upstream 4953 true Chr13: 26196209-26201161 Glycine max
Glyma.13G148400 0.5kb upstream 0.5kb upstream 500 false Chr13: 26200662-26201161 Glycine max
Glyma.13G148400 0.5kb downstream 0.5kb downstream 4953 true Chr13: 26195709-26200661 Glycine max
Glyma.13G148400 0.5kb downstream 0.5kb downstream 500 false Chr13: 26195709-26196208 Glycine max
Glyma.13G148400 1.0kb upstream 1.0kb upstream 5453 true Chr13: 26196209-26201661 Glycine max
Glyma.13G148400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 26200662-26201661 Glycine max
Glyma.13G148400 1.0kb downstream 1.0kb downstream 5453 true Chr13: 26195209-26200661 Glycine max
Glyma.13G148400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 26195209-26196208 Glycine max
Glyma.13G148400 2.0kb upstream 2.0kb upstream 6453 true Chr13: 26196209-26202661 Glycine max
Glyma.13G148400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 26200662-26202661 Glycine max
Glyma.13G148400 2.0kb downstream 2.0kb downstream 6453 true Chr13: 26194209-26200661 Glycine max
Glyma.13G148400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 26194209-26196208 Glycine max
Glyma.13G148400 5.0kb upstream 5.0kb upstream 9453 true Chr13: 26196209-26205661 Glycine max
Glyma.13G148400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 26200662-26205661 Glycine max
Glyma.13G148400 5.0kb downstream 5.0kb downstream 9453 true Chr13: 26191209-26200661 Glycine max
Glyma.13G148400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 26191209-26196208 Glycine max
Glyma.13G148400 10.0kb upstream 10.0kb upstream 14453 true Chr13: 26196209-26210661 Glycine max
Glyma.13G148400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 26200662-26210661 Glycine max
Glyma.13G148400 10.0kb downstream 10.0kb downstream 14453 true Chr13: 26186209-26200661 Glycine max
Glyma.13G148400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 26186209-26196208 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242056 5265 Fabidae Singleton cluster - no MSA
123986817 5270 Rosid Singleton cluster - no MSA
123562141 5271 Pentapetalae Singleton cluster - no MSA
122596928 5272 Eudicot Singleton cluster - no MSA
122047371 5273 Angiosperm View MSA
121347263 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1135 0.0 50.8238   High
cufflinks 8.51542 0.0 32.7678    
cufflinks 4.01994 0.0 19.8423    
cufflinks 4.88436 0.0 21.1006    
cufflinks 0.853884 0.0 6.62953   Low
cufflinks 1.39269 0.0 8.5498    
cufflinks 6.51977 0.0 27.1211    
cufflinks 1.62166 0.0 9.87844    
cufflinks 1.52313 0.0 10.1661    
cufflinks 0.902        
cufflinks 0.402        
cufflinks 2.187        
cufflinks 0.174       Low
cufflinks 0.041     Low Low
cufflinks 0.376        
cufflinks 4.646       High
cufflinks 0.301        
cufflinks 2.474        
cufflinks 2.168        
cufflinks 6.33       High
cufflinks 0.323        
cufflinks 5.766       High
cufflinks 4.737       High
cufflinks 0.289        
cufflinks 5.591       High
cufflinks 0.287        

0 Strain