Gene : Glyma.13G149000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23241:SF11 - LATE EMBRYOGENESIS ABUNDANT PROTEIN (ATECP63)-RELATED Genomic Order:  1490
Name:  ? Glyma.13G149000 Secondary Identifier:  ? PAC:30506132
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G149000 0.5kb upstream 0.5kb upstream 2862 true Chr13: 26250499-26253360 Glycine max
Glyma.13G149000 0.5kb upstream 0.5kb upstream 500 false Chr13: 26250499-26250998 Glycine max
Glyma.13G149000 0.5kb downstream 0.5kb downstream 2862 true Chr13: 26250999-26253860 Glycine max
Glyma.13G149000 0.5kb downstream 0.5kb downstream 500 false Chr13: 26253361-26253860 Glycine max
Glyma.13G149000 1.0kb upstream 1.0kb upstream 3362 true Chr13: 26249999-26253360 Glycine max
Glyma.13G149000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 26249999-26250998 Glycine max
Glyma.13G149000 1.0kb downstream 1.0kb downstream 3362 true Chr13: 26250999-26254360 Glycine max
Glyma.13G149000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 26253361-26254360 Glycine max
Glyma.13G149000 2.0kb upstream 2.0kb upstream 4362 true Chr13: 26248999-26253360 Glycine max
Glyma.13G149000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 26248999-26250998 Glycine max
Glyma.13G149000 2.0kb downstream 2.0kb downstream 4362 true Chr13: 26250999-26255360 Glycine max
Glyma.13G149000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 26253361-26255360 Glycine max
Glyma.13G149000 5.0kb upstream 5.0kb upstream 7362 true Chr13: 26245999-26253360 Glycine max
Glyma.13G149000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 26245999-26250998 Glycine max
Glyma.13G149000 5.0kb downstream 5.0kb downstream 7362 true Chr13: 26250999-26258360 Glycine max
Glyma.13G149000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 26253361-26258360 Glycine max
Glyma.13G149000 10.0kb upstream 10.0kb upstream 12362 true Chr13: 26240999-26253360 Glycine max
Glyma.13G149000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 26240999-26250998 Glycine max
Glyma.13G149000 10.0kb downstream 10.0kb downstream 12362 true Chr13: 26250999-26263360 Glycine max
Glyma.13G149000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 26253361-26263360 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315105 5265 Fabidae View MSA
124071734 5270 Rosid View MSA
123743630 5271 Pentapetalae View MSA
122796443 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.715175 0.0 2.52517    
cufflinks 0.0543072 0.0 0.216718 Low Low
cufflinks 0.0745493 0.0 0.293711 Low  
cufflinks 0.557965 0.0 2.00138    
cufflinks 0.647092 0.0 2.29211    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.696       High
cufflinks 1.806       High
cufflinks 0.064     Low  
cufflinks 0.036     Low  
cufflinks 0.017     Low  
cufflinks 0.016     Low  
cufflinks 0.43        
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.151        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.403        
cufflinks 0.017     Low  
cufflinks 0.302        

0 Strain