Gene : Glyma.13G154600 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  1546
Name:  ? Glyma.13G154600 Secondary Identifier:  ? PAC:30505392
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6012-1 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G154600 0.5kb upstream 0.5kb upstream 4476 true Chr13: 27007329-27011804 Glycine max
Glyma.13G154600 0.5kb upstream 0.5kb upstream 500 false Chr13: 27011305-27011804 Glycine max
Glyma.13G154600 0.5kb downstream 0.5kb downstream 4476 true Chr13: 27006829-27011304 Glycine max
Glyma.13G154600 0.5kb downstream 0.5kb downstream 500 false Chr13: 27006829-27007328 Glycine max
Glyma.13G154600 1.0kb upstream 1.0kb upstream 4976 true Chr13: 27007329-27012304 Glycine max
Glyma.13G154600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27011305-27012304 Glycine max
Glyma.13G154600 1.0kb downstream 1.0kb downstream 4976 true Chr13: 27006329-27011304 Glycine max
Glyma.13G154600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27006329-27007328 Glycine max
Glyma.13G154600 2.0kb upstream 2.0kb upstream 5976 true Chr13: 27007329-27013304 Glycine max
Glyma.13G154600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27011305-27013304 Glycine max
Glyma.13G154600 2.0kb downstream 2.0kb downstream 5976 true Chr13: 27005329-27011304 Glycine max
Glyma.13G154600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27005329-27007328 Glycine max
Glyma.13G154600 5.0kb upstream 5.0kb upstream 8976 true Chr13: 27007329-27016304 Glycine max
Glyma.13G154600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27011305-27016304 Glycine max
Glyma.13G154600 5.0kb downstream 5.0kb downstream 8976 true Chr13: 27002329-27011304 Glycine max
Glyma.13G154600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27002329-27007328 Glycine max
Glyma.13G154600 10.0kb upstream 10.0kb upstream 13976 true Chr13: 27007329-27021304 Glycine max
Glyma.13G154600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27011305-27021304 Glycine max
Glyma.13G154600 10.0kb downstream 10.0kb downstream 13976 true Chr13: 26997329-27011304 Glycine max
Glyma.13G154600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 26997329-27007328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308786 5265 Fabidae View MSA
124062449 5270 Rosid View MSA
123736560 5271 Pentapetalae View MSA
122793006 5272 Eudicot View MSA
122041832 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121344089 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.08272 0.0 32.163   High
cufflinks 4.20092 0.0 16.9095    
cufflinks 4.80992 0.0 18.3687    
cufflinks 3.60139 0.0 18.2426    
cufflinks 4.54803 0.0 17.8356    
cufflinks 5.88285 0.0 25.2883   High
cufflinks 2.55772 0.0 12.2682   Low
cufflinks 4.50619 0.0 21.2519    
cufflinks 3.36538 0.0 17.499    
cufflinks 0.985        
cufflinks 0.739        
cufflinks 0.684        
cufflinks 0.967        
cufflinks 1.035        
cufflinks 0.381       Low
cufflinks 0.725        
cufflinks 0.881        
cufflinks 0.77        
cufflinks 1.029        
cufflinks 0.782        
cufflinks 0.604       Low
cufflinks 1.017        
cufflinks 1.079        
cufflinks 1.215       High
cufflinks 0.733        
cufflinks 0.808        

0 Strain