Gene : Glyma.13G155500 G. max Wm82.a2.v1
Defline:  (1 of 6) KOG3301 - Ribosomal protein S4 Genomic Order:  1555
Name:  ? Glyma.13G155500 Secondary Identifier:  ? PAC:30501265
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G155500 0.5kb upstream 0.5kb upstream 935 true Chr13: 27063624-27064558 Glycine max
Glyma.13G155500 0.5kb upstream 0.5kb upstream 500 false Chr13: 27064059-27064558 Glycine max
Glyma.13G155500 0.5kb downstream 0.5kb downstream 935 true Chr13: 27063124-27064058 Glycine max
Glyma.13G155500 0.5kb downstream 0.5kb downstream 500 false Chr13: 27063124-27063623 Glycine max
Glyma.13G155500 1.0kb upstream 1.0kb upstream 1435 true Chr13: 27063624-27065058 Glycine max
Glyma.13G155500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 27064059-27065058 Glycine max
Glyma.13G155500 1.0kb downstream 1.0kb downstream 1435 true Chr13: 27062624-27064058 Glycine max
Glyma.13G155500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 27062624-27063623 Glycine max
Glyma.13G155500 2.0kb upstream 2.0kb upstream 2435 true Chr13: 27063624-27066058 Glycine max
Glyma.13G155500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 27064059-27066058 Glycine max
Glyma.13G155500 2.0kb downstream 2.0kb downstream 2435 true Chr13: 27061624-27064058 Glycine max
Glyma.13G155500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 27061624-27063623 Glycine max
Glyma.13G155500 5.0kb upstream 5.0kb upstream 5435 true Chr13: 27063624-27069058 Glycine max
Glyma.13G155500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 27064059-27069058 Glycine max
Glyma.13G155500 5.0kb downstream 5.0kb downstream 5435 true Chr13: 27058624-27064058 Glycine max
Glyma.13G155500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 27058624-27063623 Glycine max
Glyma.13G155500 10.0kb upstream 10.0kb upstream 10435 true Chr13: 27063624-27074058 Glycine max
Glyma.13G155500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 27064059-27074058 Glycine max
Glyma.13G155500 10.0kb downstream 10.0kb downstream 10435 true Chr13: 27053624-27064058 Glycine max
Glyma.13G155500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 27053624-27063623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028910 5273 Angiosperm View MSA
122240844 5265 Fabidae Singleton cluster - no MSA
123985815 5270 Rosid Singleton cluster - no MSA
123750002 5271 Pentapetalae View MSA
122790562 5272 Eudicot View MSA
121298338 5274 Embryophyte View MSA
123336315 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.44236 0.0 5.59226    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.458669 0.0 1.86055    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.231       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.108     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low Low
cufflinks 0.126        
cufflinks 0.051     Low  
cufflinks 0.052     Low  
cufflinks 0.04     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low  
cufflinks 0.244       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.212       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain