Gene : Glyma.13G198800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10315//PTHR10315:SF29 - SEVEN IN ABSENTIA HOMOLOG Genomic Order:  1988
Name:  ? Glyma.13G198800 Secondary Identifier:  ? PAC:30505695
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G198800 0.5kb upstream 0.5kb upstream 6124 true Chr13: 31252110-31258233 Glycine max
Glyma.13G198800 0.5kb upstream 0.5kb upstream 500 false Chr13: 31257734-31258233 Glycine max
Glyma.13G198800 0.5kb downstream 0.5kb downstream 6124 true Chr13: 31251610-31257733 Glycine max
Glyma.13G198800 0.5kb downstream 0.5kb downstream 500 false Chr13: 31251610-31252109 Glycine max
Glyma.13G198800 1.0kb upstream 1.0kb upstream 6624 true Chr13: 31252110-31258733 Glycine max
Glyma.13G198800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 31257734-31258733 Glycine max
Glyma.13G198800 1.0kb downstream 1.0kb downstream 6624 true Chr13: 31251110-31257733 Glycine max
Glyma.13G198800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 31251110-31252109 Glycine max
Glyma.13G198800 2.0kb upstream 2.0kb upstream 7624 true Chr13: 31252110-31259733 Glycine max
Glyma.13G198800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 31257734-31259733 Glycine max
Glyma.13G198800 2.0kb downstream 2.0kb downstream 7624 true Chr13: 31250110-31257733 Glycine max
Glyma.13G198800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 31250110-31252109 Glycine max
Glyma.13G198800 5.0kb upstream 5.0kb upstream 10624 true Chr13: 31252110-31262733 Glycine max
Glyma.13G198800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 31257734-31262733 Glycine max
Glyma.13G198800 5.0kb downstream 5.0kb downstream 10624 true Chr13: 31247110-31257733 Glycine max
Glyma.13G198800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 31247110-31252109 Glycine max
Glyma.13G198800 10.0kb upstream 10.0kb upstream 15624 true Chr13: 31252110-31267733 Glycine max
Glyma.13G198800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 31257734-31267733 Glycine max
Glyma.13G198800 10.0kb downstream 10.0kb downstream 15624 true Chr13: 31242110-31257733 Glycine max
Glyma.13G198800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 31242110-31252109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306983 5265 Fabidae View MSA
124069632 5270 Rosid View MSA
123750736 5271 Pentapetalae View MSA
122797657 5272 Eudicot View MSA
122049350 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.85639 0.0 40.6503    
cufflinks 8.57911 0.0 42.2189    
cufflinks 10.8018 0.0 41.5565    
cufflinks 7.38167 0.0 40.0562   Low
cufflinks 8.37245 0.0 42.3166    
cufflinks 14.2459 0.0 44.1547   High
cufflinks 11.9554 0.0 53.9359    
cufflinks 9.20553 0.0 40.298    
cufflinks 10.5046 0.0 49.7323    
cufflinks 1.135        
cufflinks 3.521       High
cufflinks 0.89        
cufflinks 0.725        
cufflinks 0.552       Low
cufflinks 1.126        
cufflinks 0.816        
cufflinks 3.363       High
cufflinks 0.875        
cufflinks 1.003        
cufflinks 0.702        
cufflinks 2.327        
cufflinks 0.771        
cufflinks 1.003        
cufflinks 3.735       High
cufflinks 0.689        
cufflinks 2.879       High

0 Strain