Gene : Glyma.13G201800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF611 - CHROMATIN REMODELING PROTEIN-RELATED Genomic Order:  2018
Name:  ? Glyma.13G201800 Secondary Identifier:  ? PAC:30501994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G201800 0.5kb upstream 0.5kb upstream 7078 true Chr13: 31544909-31551986 Glycine max
Glyma.13G201800 0.5kb upstream 0.5kb upstream 500 false Chr13: 31544909-31545408 Glycine max
Glyma.13G201800 0.5kb downstream 0.5kb downstream 7078 true Chr13: 31545409-31552486 Glycine max
Glyma.13G201800 0.5kb downstream 0.5kb downstream 500 false Chr13: 31551987-31552486 Glycine max
Glyma.13G201800 1.0kb upstream 1.0kb upstream 7578 true Chr13: 31544409-31551986 Glycine max
Glyma.13G201800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 31544409-31545408 Glycine max
Glyma.13G201800 1.0kb downstream 1.0kb downstream 7578 true Chr13: 31545409-31552986 Glycine max
Glyma.13G201800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 31551987-31552986 Glycine max
Glyma.13G201800 2.0kb upstream 2.0kb upstream 8578 true Chr13: 31543409-31551986 Glycine max
Glyma.13G201800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 31543409-31545408 Glycine max
Glyma.13G201800 2.0kb downstream 2.0kb downstream 8578 true Chr13: 31545409-31553986 Glycine max
Glyma.13G201800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 31551987-31553986 Glycine max
Glyma.13G201800 5.0kb upstream 5.0kb upstream 11578 true Chr13: 31540409-31551986 Glycine max
Glyma.13G201800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 31540409-31545408 Glycine max
Glyma.13G201800 5.0kb downstream 5.0kb downstream 11578 true Chr13: 31545409-31556986 Glycine max
Glyma.13G201800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 31551987-31556986 Glycine max
Glyma.13G201800 10.0kb upstream 10.0kb upstream 16578 true Chr13: 31535409-31551986 Glycine max
Glyma.13G201800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 31535409-31545408 Glycine max
Glyma.13G201800 10.0kb downstream 10.0kb downstream 16578 true Chr13: 31545409-31561986 Glycine max
Glyma.13G201800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 31551987-31561986 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254647 5265 Fabidae View MSA
124061446 5270 Rosid View MSA
123736645 5271 Pentapetalae View MSA
122794174 5272 Eudicot View MSA
122049979 5273 Angiosperm View MSA
121351662 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.614568 0.0 2.61039    
cufflinks 0.180061 0.0 0.891831 Low  
cufflinks 1.92121 0.0 7.51717   High
cufflinks 0.0173214 0.0 0.0744261 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.139325 0.0 0.688506 Low  
cufflinks 0.111819 0.0 0.558524 Low  
cufflinks 0.0468355 0.0 0.18674 Low  
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.22       High
cufflinks 0.001     Low Low
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.001     Low Low
cufflinks 0.299       High
cufflinks 0.134       High
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.008     Low  
cufflinks 0.002     Low  
cufflinks 0.009     Low  
cufflinks 0.001     Low Low

0 Strain