Gene : Glyma.13G203300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF75 - E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  2033
Name:  ? Glyma.13G203300 Secondary Identifier:  ? PAC:30503704
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G203300 0.5kb upstream 0.5kb upstream 8570 true Chr13: 31727841-31736410 Glycine max
Glyma.13G203300 0.5kb upstream 0.5kb upstream 500 false Chr13: 31735911-31736410 Glycine max
Glyma.13G203300 0.5kb downstream 0.5kb downstream 8570 true Chr13: 31727341-31735910 Glycine max
Glyma.13G203300 0.5kb downstream 0.5kb downstream 500 false Chr13: 31727341-31727840 Glycine max
Glyma.13G203300 1.0kb upstream 1.0kb upstream 9070 true Chr13: 31727841-31736910 Glycine max
Glyma.13G203300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 31735911-31736910 Glycine max
Glyma.13G203300 1.0kb downstream 1.0kb downstream 9070 true Chr13: 31726841-31735910 Glycine max
Glyma.13G203300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 31726841-31727840 Glycine max
Glyma.13G203300 2.0kb upstream 2.0kb upstream 10070 true Chr13: 31727841-31737910 Glycine max
Glyma.13G203300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 31735911-31737910 Glycine max
Glyma.13G203300 2.0kb downstream 2.0kb downstream 10070 true Chr13: 31725841-31735910 Glycine max
Glyma.13G203300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 31725841-31727840 Glycine max
Glyma.13G203300 5.0kb upstream 5.0kb upstream 13070 true Chr13: 31727841-31740910 Glycine max
Glyma.13G203300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 31735911-31740910 Glycine max
Glyma.13G203300 5.0kb downstream 5.0kb downstream 13070 true Chr13: 31722841-31735910 Glycine max
Glyma.13G203300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 31722841-31727840 Glycine max
Glyma.13G203300 10.0kb upstream 10.0kb upstream 18070 true Chr13: 31727841-31745910 Glycine max
Glyma.13G203300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 31735911-31745910 Glycine max
Glyma.13G203300 10.0kb downstream 10.0kb downstream 18070 true Chr13: 31717841-31735910 Glycine max
Glyma.13G203300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 31717841-31727840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313897 5265 Fabidae View MSA
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.93067 0.0 16.9719    
cufflinks 5.67125 0.0 26.2415   High
cufflinks 3.78808 0.0 20.622    
cufflinks 3.67154 0.0 22.9783    
cufflinks 4.33279 0.0 18.1774    
cufflinks 2.44186 0.0 12.2439   Low
cufflinks 5.93441 0.0 26.8428   High
cufflinks 3.42615 0.0 15.3801    
cufflinks 2.98496 0.0 17.2673    
cufflinks 0.236        
cufflinks 0.057       Low
cufflinks 0.318        
cufflinks 0.286        
cufflinks 0.307        
cufflinks 0.112        
cufflinks 0.314        
cufflinks 0.073       Low
cufflinks 0.304        
cufflinks 0.376        
cufflinks 0.321        
cufflinks 0.081       Low
cufflinks 0.319        
cufflinks 0.392        
cufflinks 0.045     Low Low
cufflinks 0.289        
cufflinks 0.104        

0 Strain