Gene : Glyma.13G203900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR10366:SF425 - BRASSINOSTEROID METABOLIC PATHWAY PROTEIN BEN1 Genomic Order:  2039
Name:  ? Glyma.13G203900 Secondary Identifier:  ? PAC:30503235
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2229 Glycine max pathologic  
Gmax PWY-2463 Glycine max pathologic  
Gmax PWY-2464 Glycine max pathologic  
Gmax PWY-2761 Glycine max pathologic  
Gmax PWY-5717 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G203900 0.5kb upstream 0.5kb upstream 3405 true Chr13: 31793697-31797101 Glycine max
Glyma.13G203900 0.5kb upstream 0.5kb upstream 500 false Chr13: 31796602-31797101 Glycine max
Glyma.13G203900 0.5kb downstream 0.5kb downstream 3405 true Chr13: 31793197-31796601 Glycine max
Glyma.13G203900 0.5kb downstream 0.5kb downstream 500 false Chr13: 31793197-31793696 Glycine max
Glyma.13G203900 1.0kb upstream 1.0kb upstream 3905 true Chr13: 31793697-31797601 Glycine max
Glyma.13G203900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 31796602-31797601 Glycine max
Glyma.13G203900 1.0kb downstream 1.0kb downstream 3905 true Chr13: 31792697-31796601 Glycine max
Glyma.13G203900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 31792697-31793696 Glycine max
Glyma.13G203900 2.0kb upstream 2.0kb upstream 4905 true Chr13: 31793697-31798601 Glycine max
Glyma.13G203900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 31796602-31798601 Glycine max
Glyma.13G203900 2.0kb downstream 2.0kb downstream 4905 true Chr13: 31791697-31796601 Glycine max
Glyma.13G203900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 31791697-31793696 Glycine max
Glyma.13G203900 5.0kb upstream 5.0kb upstream 7905 true Chr13: 31793697-31801601 Glycine max
Glyma.13G203900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 31796602-31801601 Glycine max
Glyma.13G203900 5.0kb downstream 5.0kb downstream 7905 true Chr13: 31788697-31796601 Glycine max
Glyma.13G203900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 31788697-31793696 Glycine max
Glyma.13G203900 10.0kb upstream 10.0kb upstream 12905 true Chr13: 31793697-31806601 Glycine max
Glyma.13G203900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 31796602-31806601 Glycine max
Glyma.13G203900 10.0kb downstream 10.0kb downstream 12905 true Chr13: 31783697-31796601 Glycine max
Glyma.13G203900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 31783697-31793696 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031301 5273 Angiosperm View MSA
122316513 5265 Fabidae View MSA
124066855 5270 Rosid View MSA
123745083 5271 Pentapetalae View MSA
122790638 5272 Eudicot View MSA
121300366 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.207952 0.0 0.80953 Low Low
cufflinks 11.9542 0.0 44.7014   High
cufflinks 0.493664 0.0 2.45844    
cufflinks 13.8565 0.0 51.14   High
cufflinks 0.604754 0.0 2.96671    
cufflinks 0.534295 0.0 2.61867    
cufflinks 4.90114 0.0 20.2804    
cufflinks 7.83611 0.0 32.0271    
cufflinks 1.29567 0.0 5.61654    
cufflinks 0.961        
cufflinks 0.02     Low Low
cufflinks 0.143        
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 2.606       High
cufflinks 0.345        
cufflinks 0.25        
cufflinks 6.174       High
cufflinks 0.499        
cufflinks 0.041     Low  
cufflinks 1.161        
cufflinks 1.908       High
cufflinks 0.013     Low Low
cufflinks 1.349        
cufflinks 0.022     Low Low

0 Strain