Gene : Glyma.13G195700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12383//PTHR12383:SF23 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED Genomic Order:  1957
Name:  ? Glyma.13G195700 Secondary Identifier:  ? PAC:30503198
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G195700 0.5kb upstream 0.5kb upstream 2741 true Chr13: 30923915-30926655 Glycine max
Glyma.13G195700 0.5kb upstream 0.5kb upstream 500 false Chr13: 30926156-30926655 Glycine max
Glyma.13G195700 0.5kb downstream 0.5kb downstream 2741 true Chr13: 30923415-30926155 Glycine max
Glyma.13G195700 0.5kb downstream 0.5kb downstream 500 false Chr13: 30923415-30923914 Glycine max
Glyma.13G195700 1.0kb upstream 1.0kb upstream 3241 true Chr13: 30923915-30927155 Glycine max
Glyma.13G195700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30926156-30927155 Glycine max
Glyma.13G195700 1.0kb downstream 1.0kb downstream 3241 true Chr13: 30922915-30926155 Glycine max
Glyma.13G195700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30922915-30923914 Glycine max
Glyma.13G195700 2.0kb upstream 2.0kb upstream 4241 true Chr13: 30923915-30928155 Glycine max
Glyma.13G195700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30926156-30928155 Glycine max
Glyma.13G195700 2.0kb downstream 2.0kb downstream 4241 true Chr13: 30921915-30926155 Glycine max
Glyma.13G195700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30921915-30923914 Glycine max
Glyma.13G195700 5.0kb upstream 5.0kb upstream 7241 true Chr13: 30923915-30931155 Glycine max
Glyma.13G195700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30926156-30931155 Glycine max
Glyma.13G195700 5.0kb downstream 5.0kb downstream 7241 true Chr13: 30918915-30926155 Glycine max
Glyma.13G195700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30918915-30923914 Glycine max
Glyma.13G195700 10.0kb upstream 10.0kb upstream 12241 true Chr13: 30923915-30936155 Glycine max
Glyma.13G195700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30926156-30936155 Glycine max
Glyma.13G195700 10.0kb downstream 10.0kb downstream 12241 true Chr13: 30913915-30926155 Glycine max
Glyma.13G195700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30913915-30923914 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298262 5265 Fabidae View MSA
124064191 5270 Rosid View MSA
123740275 5271 Pentapetalae View MSA
122796952 5272 Eudicot View MSA
122051695 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348112 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.68223 0.0 16.4056   Low
cufflinks 4.10809 0.0 17.6625    
cufflinks 4.8482 0.0 19.5661    
cufflinks 3.11201 0.0 14.761   Low
cufflinks 5.39361 0.0 21.2673    
cufflinks 8.28242 0.0 28.4627   High
cufflinks 4.88662 0.0 20.0263    
cufflinks 6.30563 0.0 23.6627    
cufflinks 5.92025 0.0 22.5529    
cufflinks 1.281        
cufflinks 0.761        
cufflinks 1.534       High
cufflinks 1.552       High
cufflinks 2.319       High
cufflinks 0.792        
cufflinks 0.707        
cufflinks 0.923        
cufflinks 1.179        
cufflinks 1.47        
cufflinks 0.52       Low
cufflinks 0.99        
cufflinks 0.664       Low
cufflinks 0.732        
cufflinks 1.06        
cufflinks 0.688        
cufflinks 1.078        

0 Strain