Gene : Glyma.13G187300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Genomic Order:  1873
Name:  ? Glyma.13G187300 Secondary Identifier:  ? PAC:30505793
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G187300 0.5kb upstream 0.5kb upstream 4819 true Chr13: 30113347-30118165 Glycine max
Glyma.13G187300 0.5kb upstream 0.5kb upstream 500 false Chr13: 30113347-30113846 Glycine max
Glyma.13G187300 0.5kb downstream 0.5kb downstream 4819 true Chr13: 30113847-30118665 Glycine max
Glyma.13G187300 0.5kb downstream 0.5kb downstream 500 false Chr13: 30118166-30118665 Glycine max
Glyma.13G187300 1.0kb upstream 1.0kb upstream 5319 true Chr13: 30112847-30118165 Glycine max
Glyma.13G187300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30112847-30113846 Glycine max
Glyma.13G187300 1.0kb downstream 1.0kb downstream 5319 true Chr13: 30113847-30119165 Glycine max
Glyma.13G187300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30118166-30119165 Glycine max
Glyma.13G187300 2.0kb upstream 2.0kb upstream 6319 true Chr13: 30111847-30118165 Glycine max
Glyma.13G187300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30111847-30113846 Glycine max
Glyma.13G187300 2.0kb downstream 2.0kb downstream 6319 true Chr13: 30113847-30120165 Glycine max
Glyma.13G187300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30118166-30120165 Glycine max
Glyma.13G187300 5.0kb upstream 5.0kb upstream 9319 true Chr13: 30108847-30118165 Glycine max
Glyma.13G187300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30108847-30113846 Glycine max
Glyma.13G187300 5.0kb downstream 5.0kb downstream 9319 true Chr13: 30113847-30123165 Glycine max
Glyma.13G187300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30118166-30123165 Glycine max
Glyma.13G187300 10.0kb upstream 10.0kb upstream 14319 true Chr13: 30103847-30118165 Glycine max
Glyma.13G187300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30103847-30113846 Glycine max
Glyma.13G187300 10.0kb downstream 10.0kb downstream 14319 true Chr13: 30113847-30128165 Glycine max
Glyma.13G187300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30118166-30128165 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304825 5265 Fabidae View MSA
124067647 5270 Rosid View MSA
123739442 5271 Pentapetalae View MSA
122787900 5272 Eudicot View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.49716 0.0 28.7254    
cufflinks 6.37863 0.0 23.0228    
cufflinks 8.29261 0.0 26.9123   High
cufflinks 6.39648 0.0 22.0728    
cufflinks 4.42197 0.0 17.1444   Low
cufflinks 6.29853 0.0 21.9298    
cufflinks 5.77609 0.0 20.6571    
cufflinks 8.75656 0.0 28.3144   High
cufflinks 6.80993 0.0 23.1478    
cufflinks 0.694        
cufflinks 0.531        
cufflinks 1.091       High
cufflinks 0.622        
cufflinks 0.652        
cufflinks 0.276       Low
cufflinks 0.54        
cufflinks 0.501        
cufflinks 1.006       High
cufflinks 0.822        
cufflinks 0.519        
cufflinks 0.359       Low
cufflinks 0.653        
cufflinks 0.499        
cufflinks 0.756        
cufflinks 0.587        
cufflinks 0.505        

0 Strain