Gene : Glyma.13G187500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10641:SF475 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  1875
Name:  ? Glyma.13G187500 Secondary Identifier:  ? PAC:30503443
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G187500 0.5kb upstream 0.5kb upstream 5810 true Chr13: 30128163-30133972 Glycine max
Glyma.13G187500 0.5kb upstream 0.5kb upstream 500 false Chr13: 30128163-30128662 Glycine max
Glyma.13G187500 0.5kb downstream 0.5kb downstream 5810 true Chr13: 30128663-30134472 Glycine max
Glyma.13G187500 0.5kb downstream 0.5kb downstream 500 false Chr13: 30133973-30134472 Glycine max
Glyma.13G187500 1.0kb upstream 1.0kb upstream 6310 true Chr13: 30127663-30133972 Glycine max
Glyma.13G187500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30127663-30128662 Glycine max
Glyma.13G187500 1.0kb downstream 1.0kb downstream 6310 true Chr13: 30128663-30134972 Glycine max
Glyma.13G187500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30133973-30134972 Glycine max
Glyma.13G187500 2.0kb upstream 2.0kb upstream 7310 true Chr13: 30126663-30133972 Glycine max
Glyma.13G187500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30126663-30128662 Glycine max
Glyma.13G187500 2.0kb downstream 2.0kb downstream 7310 true Chr13: 30128663-30135972 Glycine max
Glyma.13G187500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30133973-30135972 Glycine max
Glyma.13G187500 5.0kb upstream 5.0kb upstream 10310 true Chr13: 30123663-30133972 Glycine max
Glyma.13G187500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30123663-30128662 Glycine max
Glyma.13G187500 5.0kb downstream 5.0kb downstream 10310 true Chr13: 30128663-30138972 Glycine max
Glyma.13G187500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30133973-30138972 Glycine max
Glyma.13G187500 10.0kb upstream 10.0kb upstream 15310 true Chr13: 30118663-30133972 Glycine max
Glyma.13G187500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30118663-30128662 Glycine max
Glyma.13G187500 10.0kb downstream 10.0kb downstream 15310 true Chr13: 30128663-30143972 Glycine max
Glyma.13G187500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30133973-30143972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305982 5265 Fabidae View MSA
124068155 5270 Rosid View MSA
123747278 5271 Pentapetalae View MSA
122786891 5272 Eudicot View MSA
122046839 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121350966 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.47324 0.0 6.71044   High
cufflinks 0.630199 0.0 3.52296    
cufflinks 1.5312 0.0 6.82319   High
cufflinks 0.6228 0.0 3.46992    
cufflinks 0.705773 0.0 3.87793    
cufflinks 1.17544 0.0 5.70467    
cufflinks 1.45352 0.0 6.68003   High
cufflinks 0.472658 0.0 2.78753   Low
cufflinks 0.419663 0.0 2.53592   Low
cufflinks 0.652        
cufflinks 0.32        
cufflinks 0.644        
cufflinks 0.334        
cufflinks 0.219        
cufflinks 0.073       Low
cufflinks 0.397        
cufflinks 0.714        
cufflinks 1.719       High
cufflinks 0.233        
cufflinks 0.405        
cufflinks 0.229        
cufflinks 0.458        
cufflinks 0.424        
cufflinks 0.272        
cufflinks 0.409        
cufflinks 0.172       Low

0 Strain