Gene : Glyma.13G189200 G. max Wm82.a2.v1
Defline:  (1 of 55) PF00627 - UBA/TS-N domain Genomic Order:  1892
Name:  ? Glyma.13G189200 Secondary Identifier:  ? PAC:30505852
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G189200 0.5kb upstream 0.5kb upstream 4106 true Chr13: 30263916-30268021 Glycine max
Glyma.13G189200 0.5kb upstream 0.5kb upstream 500 false Chr13: 30267522-30268021 Glycine max
Glyma.13G189200 0.5kb downstream 0.5kb downstream 4106 true Chr13: 30263416-30267521 Glycine max
Glyma.13G189200 0.5kb downstream 0.5kb downstream 500 false Chr13: 30263416-30263915 Glycine max
Glyma.13G189200 1.0kb upstream 1.0kb upstream 4606 true Chr13: 30263916-30268521 Glycine max
Glyma.13G189200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30267522-30268521 Glycine max
Glyma.13G189200 1.0kb downstream 1.0kb downstream 4606 true Chr13: 30262916-30267521 Glycine max
Glyma.13G189200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30262916-30263915 Glycine max
Glyma.13G189200 2.0kb upstream 2.0kb upstream 5606 true Chr13: 30263916-30269521 Glycine max
Glyma.13G189200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30267522-30269521 Glycine max
Glyma.13G189200 2.0kb downstream 2.0kb downstream 5606 true Chr13: 30261916-30267521 Glycine max
Glyma.13G189200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30261916-30263915 Glycine max
Glyma.13G189200 5.0kb upstream 5.0kb upstream 8606 true Chr13: 30263916-30272521 Glycine max
Glyma.13G189200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30267522-30272521 Glycine max
Glyma.13G189200 5.0kb downstream 5.0kb downstream 8606 true Chr13: 30258916-30267521 Glycine max
Glyma.13G189200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30258916-30263915 Glycine max
Glyma.13G189200 10.0kb upstream 10.0kb upstream 13606 true Chr13: 30263916-30277521 Glycine max
Glyma.13G189200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30267522-30277521 Glycine max
Glyma.13G189200 10.0kb downstream 10.0kb downstream 13606 true Chr13: 30253916-30267521 Glycine max
Glyma.13G189200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30253916-30263915 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297510 5265 Fabidae View MSA
124063502 5270 Rosid View MSA
123746893 5271 Pentapetalae View MSA
122791489 5272 Eudicot View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13555 0.0 6.61869    
cufflinks 2.46065 0.0 7.48557    
cufflinks 2.04737 0.0 6.36402    
cufflinks 1.57176 0.0 5.08285    
cufflinks 1.14308 0.0 3.8556   Low
cufflinks 1.35823 0.0 4.48959    
cufflinks 1.79147 0.0 5.69127    
cufflinks 2.87423 0.0 8.53492   High
cufflinks 0.87747 0.0 3.04503   Low
cufflinks 1.15        
cufflinks 0.817        
cufflinks 1.466       High
cufflinks 1.064        
cufflinks 1.283        
cufflinks 0.409       Low
cufflinks 0.959        
cufflinks 0.627        
cufflinks 1.865       High
cufflinks 2.024       High
cufflinks 0.537       Low
cufflinks 0.725        
cufflinks 0.843        
cufflinks 0.615        
cufflinks 0.906        
cufflinks 0.666        
cufflinks 0.677        

0 Strain