Gene : Glyma.13G190200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12383//PTHR12383:SF23 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED Genomic Order:  1902
Name:  ? Glyma.13G190200 Secondary Identifier:  ? PAC:30501245
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G190200 0.5kb upstream 0.5kb upstream 3527 true Chr13: 30369321-30372847 Glycine max
Glyma.13G190200 0.5kb upstream 0.5kb upstream 500 false Chr13: 30372348-30372847 Glycine max
Glyma.13G190200 0.5kb downstream 0.5kb downstream 3527 true Chr13: 30368821-30372347 Glycine max
Glyma.13G190200 0.5kb downstream 0.5kb downstream 500 false Chr13: 30368821-30369320 Glycine max
Glyma.13G190200 1.0kb upstream 1.0kb upstream 4027 true Chr13: 30369321-30373347 Glycine max
Glyma.13G190200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30372348-30373347 Glycine max
Glyma.13G190200 1.0kb downstream 1.0kb downstream 4027 true Chr13: 30368321-30372347 Glycine max
Glyma.13G190200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30368321-30369320 Glycine max
Glyma.13G190200 2.0kb upstream 2.0kb upstream 5027 true Chr13: 30369321-30374347 Glycine max
Glyma.13G190200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30372348-30374347 Glycine max
Glyma.13G190200 2.0kb downstream 2.0kb downstream 5027 true Chr13: 30367321-30372347 Glycine max
Glyma.13G190200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30367321-30369320 Glycine max
Glyma.13G190200 5.0kb upstream 5.0kb upstream 8027 true Chr13: 30369321-30377347 Glycine max
Glyma.13G190200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30372348-30377347 Glycine max
Glyma.13G190200 5.0kb downstream 5.0kb downstream 8027 true Chr13: 30364321-30372347 Glycine max
Glyma.13G190200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30364321-30369320 Glycine max
Glyma.13G190200 10.0kb upstream 10.0kb upstream 13027 true Chr13: 30369321-30382347 Glycine max
Glyma.13G190200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30372348-30382347 Glycine max
Glyma.13G190200 10.0kb downstream 10.0kb downstream 13027 true Chr13: 30359321-30372347 Glycine max
Glyma.13G190200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30359321-30369320 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298262 5265 Fabidae View MSA
124064191 5270 Rosid View MSA
123740275 5271 Pentapetalae View MSA
122796952 5272 Eudicot View MSA
122051695 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348112 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.7146 0.0 38.0264    
cufflinks 18.6198 0.0 50.4409    
cufflinks 9.26214 0.0 26.5897   Low
cufflinks 11.8894 0.0 33.3177    
cufflinks 19.1911 0.0 51.9758    
cufflinks 14.497 0.0 39.9432    
cufflinks 30.2322 0.0 80.6871 High High
cufflinks 16.2671 0.0 44.4472    
cufflinks 20.7185 0.0 55.8314 High  
cufflinks 2.284        
cufflinks 1.635       Low
cufflinks 3.344        
cufflinks 5.406       High
cufflinks 7.562     High High
cufflinks 2.897        
cufflinks 2.815        
cufflinks 1.931        
cufflinks 3.461        
cufflinks 4.495        
cufflinks 3.746        
cufflinks 1.575       Low
cufflinks 3.28        
cufflinks 3.599        
cufflinks 1.774       Low
cufflinks 3.604        
cufflinks 1.782       Low

0 Strain